Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is ada [H]
Identifier: 158340505
GI number: 158340505
Start: 54103
End: 54990
Strand: Direct
Name: ada [H]
Synonym: AM1_C0050
Alternate gene names: 158340505
Gene position: 54103-54990 (Clockwise)
Preceding gene: 158340502
Following gene: 158340506
Centisome position: 19.81
GC content: 47.97
Gene sequence:
>888_bases ATGGGTCTACGAAGACTTACCCCGGAAGACGACCCGTCAGACCACTATCAGATGGTCGCAGCAGCAATCGCTTTTATTCG TGAGCATCGCTTTGAGCAGCCAGCCTTATCTACCGTTGCTCAGCACATCGGACTGAGTGAGTACCACTTTCAAAGGCTAT TTACCTATTGGGCAGGTATTAGCCCAAAGCGGTTTCTGCAATATCTGACGATTGAGCAAGCCAAAGCGACTATTGCTCAA ACGGATAGTTTACTTACACTCAGCGAAGATCTAGGTCTTTCAGGCCCTAGCCGTTTACACGATCTGTTCGTTTCTATAGA AGCGATGTCACCTGGCGAATATAAAAATGGTGGCGAAGGACTAGAAATATACAACGGTTCGCACAACACCTTGTTTGGAA CCGTTGTGATCGCCACAACAAAAAGAGGTATCTGCTCACTTCAGTTTCAAGACAAGGCCACGCTGCCTGTAGACGACTTG CTAACCAATACTTGGCCGAATGCCACGTTGACTGTGGATCAGGAGAAAACACAGGGGTTGTGTGATCGCATCTTTTTACC AGAGATGTCTCAGCCGACTAAGCCCTTGACACTGCTAGTTAAGGGAACAAACTTTCAAGTCCAAGTCTGGCGAGCGTTGC TTCAAATTCCACTAGGTGGTCTCACAACTTACCAAACAATCGCTGAGATGATCGAGCGACCTAAAGCTGCTAGGGCTGTC GGTACTGCCATTGGCAAGAATCCGATTGGCTATCTCATTCCTTGTCATCGTGTTATTCGAGGCTCAGGAGAGATCGGTGG CTACAGTTGGGGACTAGATCGCAAGCAAGCCATCTTAGGTTGGGAAGCTGCCCAACTCAATCATTCAACCATACAGGAAG GAAGCTAA
Upstream 100 bases:
>100_bases CAGTGAAGCCTGTCCACTATCTAATCATCGCAAGAATCGGGTGGCTCATTTGTTCATAGCTTTTGTAAGCTAATGCGAAC ACATCCTAGAGAAAACTGGT
Downstream 100 bases:
>100_bases TGCGGTTATCGGATGTCCTTGAACTTCTTCTGCTATCTGCGCTATGGGGCGGTTCGTTTTTGTTCATGCGCATAGCGGCA CCCGTACTAGGCCCAATCTG
Product: methylated DNA-protein cysteine methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGLRRLTPEDDPSDHYQMVAAAIAFIREHRFEQPALSTVAQHIGLSEYHFQRLFTYWAGISPKRFLQYLTIEQAKATIAQ TDSLLTLSEDLGLSGPSRLHDLFVSIEAMSPGEYKNGGEGLEIYNGSHNTLFGTVVIATTKRGICSLQFQDKATLPVDDL LTNTWPNATLTVDQEKTQGLCDRIFLPEMSQPTKPLTLLVKGTNFQVQVWRALLQIPLGGLTTYQTIAEMIERPKAARAV GTAIGKNPIGYLIPCHRVIRGSGEIGGYSWGLDRKQAILGWEAAQLNHSTIQEGS
Sequences:
>Translated_295_residues MGLRRLTPEDDPSDHYQMVAAAIAFIREHRFEQPALSTVAQHIGLSEYHFQRLFTYWAGISPKRFLQYLTIEQAKATIAQ TDSLLTLSEDLGLSGPSRLHDLFVSIEAMSPGEYKNGGEGLEIYNGSHNTLFGTVVIATTKRGICSLQFQDKATLPVDDL LTNTWPNATLTVDQEKTQGLCDRIFLPEMSQPTKPLTLLVKGTNFQVQVWRALLQIPLGGLTTYQTIAEMIERPKAARAV GTAIGKNPIGYLIPCHRVIRGSGEIGGYSWGLDRKQAILGWEAAQLNHSTIQEGS >Mature_294_residues GLRRLTPEDDPSDHYQMVAAAIAFIREHRFEQPALSTVAQHIGLSEYHFQRLFTYWAGISPKRFLQYLTIEQAKATIAQT DSLLTLSEDLGLSGPSRLHDLFVSIEAMSPGEYKNGGEGLEIYNGSHNTLFGTVVIATTKRGICSLQFQDKATLPVDDLL TNTWPNATLTVDQEKTQGLCDRIFLPEMSQPTKPLTLLVKGTNFQVQVWRALLQIPLGGLTTYQTIAEMIERPKAARAVG TAIGKNPIGYLIPCHRVIRGSGEIGGYSWGLDRKQAILGWEAAQLNHSTIQEGS
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=85, Percent_Identity=44.7058823529412, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1788542, Length=252, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1787596, Length=78, Percent_Identity=50, Blast_Score=81, Evalue=8e-17, Organism=Caenorhabditis elegans, GI115533070, Length=89, Percent_Identity=41.5730337078652, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115533068, Length=89, Percent_Identity=41.5730337078652, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320001, Length=81, Percent_Identity=41.9753086419753, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI17137554, Length=143, Percent_Identity=33.5664335664336, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 32625; Mature: 32493
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRRLTPEDDPSDHYQMVAAAIAFIREHRFEQPALSTVAQHIGLSEYHFQRLFTYWAGI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC SPKRFLQYLTIEQAKATIAQTDSLLTLSEDLGLSGPSRLHDLFVSIEAMSPGEYKNGGEG CHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCC LEIYNGSHNTLFGTVVIATTKRGICSLQFQDKATLPVDDLLTNTWPNATLTVDQEKTQGL EEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEECCHHHHHH CDRIFLPEMSQPTKPLTLLVKGTNFQVQVWRALLQIPLGGLTTYQTIAEMIERPKAARAV HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH GTAIGKNPIGYLIPCHRVIRGSGEIGGYSWGLDRKQAILGWEAAQLNHSTIQEGS HHHHCCCCCCEEECHHHHHCCCCCCCCEECCCCCHHHHHCCHHHHCCCCHHCCCC >Mature Secondary Structure GLRRLTPEDDPSDHYQMVAAAIAFIREHRFEQPALSTVAQHIGLSEYHFQRLFTYWAGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC SPKRFLQYLTIEQAKATIAQTDSLLTLSEDLGLSGPSRLHDLFVSIEAMSPGEYKNGGEG CHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCC LEIYNGSHNTLFGTVVIATTKRGICSLQFQDKATLPVDDLLTNTWPNATLTVDQEKTQGL EEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEECCHHHHHH CDRIFLPEMSQPTKPLTLLVKGTNFQVQVWRALLQIPLGGLTTYQTIAEMIERPKAARAV HHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHH GTAIGKNPIGYLIPCHRVIRGSGEIGGYSWGLDRKQAILGWEAAQLNHSTIQEGS HHHHCCCCCCEEECHHHHHCCCCCCCCEECCCCCHHHHHCCHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]