Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340502
Identifier: 158340502
GI number: 158340502
Start: 52684
End: 53505
Strand: Direct
Name: 158340502
Synonym: AM1_C0047
Alternate gene names: NA
Gene position: 52684-53505 (Clockwise)
Preceding gene: 158340500
Following gene: 158340505
Centisome position: 19.29
GC content: 46.47
Gene sequence:
>822_bases ATGCCCTCAGCAACTATCGACAAGCTCAACCAACTCAAAGTTCAGCTTAAGCAGTGCAACAATGACACTGCTGCTCTACT CCTAAAACGGACGATTGCAAAACTCGAATCTCAACTCCAGAGAGAGCAGCTTACAACACAGTCTGCCAAAATACCCTCAA AAGAAATACCAAAGGTCTCTCAGGCTATTTTCAAACAACAATCTTTAGTCCAGGATAAGAAAGTAGTACCTCAACAACAG CAGATTACAAAGAATCTTCAGGCAAAATCCAAGCAGCGAAACCATCGCAAAAAGAGACGGCCTCTGCTCCCTGGCAATGG CACACATCGCGCCTGGTGCAGGATTCCAGGAATCATCCGAGTTCAGGAAGTGGAAGGTGAGGGAGAACAGCCAGTATATT TCATAGAACTGGATGGTCATCAGCTCCCTTTGAGGGTAAAGAAGCGCTTCAGCAAATTGATAGGAGCGTCATTGGATACT CCTTTAATGGTGAAATGCTACCCTCAAATTATTGAAGGTCAAATTGTTTTCTTGCAGTTTTGTGGTGCTGCTGAACCGAC CCCTGAGACCCCTGAAGACTGGGTGATGATCGGTGTGTGGAATTCAGAGAATCAGCGAGTCTTAGTACAGCGTGATCAAA GATGCGATCAGAGCAGGCGCATCCTTCAACATTCTCCGCTAGTGAAAGAGGCATGTTTGGAGAAACTGGAGGCTGGAAAG CTTTATCGGTATCAATGTCAGAGAGAGGGAATCACCGTGACGATCGTGGGTGTGGAGGTTGTTGAGGGTGAGGAAGGGAA AATTGTTCAGGAAGCCTCATAG
Upstream 100 bases:
>100_bases TGGGCTGTGTGACGTTTTCTGGCAAGAATCCCGAATTTAACCCAAAGACCAACTTCATACCTTAGAATAGCCGCAAGTTT GCACCTAGCGAGGTTTCCCC
Downstream 100 bases:
>100_bases CTCTGAAAAACCATTGAGCTATGAGATCAGATTCTATTATTCAAATTAGCTCTACCAGCGATTACCACCACCTCTGTTCT CATGGGGTCTGGCTTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPSATIDKLNQLKVQLKQCNNDTAALLLKRTIAKLESQLQREQLTTQSAKIPSKEIPKVSQAIFKQQSLVQDKKVVPQQQ QITKNLQAKSKQRNHRKKRRPLLPGNGTHRAWCRIPGIIRVQEVEGEGEQPVYFIELDGHQLPLRVKKRFSKLIGASLDT PLMVKCYPQIIEGQIVFLQFCGAAEPTPETPEDWVMIGVWNSENQRVLVQRDQRCDQSRRILQHSPLVKEACLEKLEAGK LYRYQCQREGITVTIVGVEVVEGEEGKIVQEAS
Sequences:
>Translated_273_residues MPSATIDKLNQLKVQLKQCNNDTAALLLKRTIAKLESQLQREQLTTQSAKIPSKEIPKVSQAIFKQQSLVQDKKVVPQQQ QITKNLQAKSKQRNHRKKRRPLLPGNGTHRAWCRIPGIIRVQEVEGEGEQPVYFIELDGHQLPLRVKKRFSKLIGASLDT PLMVKCYPQIIEGQIVFLQFCGAAEPTPETPEDWVMIGVWNSENQRVLVQRDQRCDQSRRILQHSPLVKEACLEKLEAGK LYRYQCQREGITVTIVGVEVVEGEEGKIVQEAS >Mature_272_residues PSATIDKLNQLKVQLKQCNNDTAALLLKRTIAKLESQLQREQLTTQSAKIPSKEIPKVSQAIFKQQSLVQDKKVVPQQQQ ITKNLQAKSKQRNHRKKRRPLLPGNGTHRAWCRIPGIIRVQEVEGEGEQPVYFIELDGHQLPLRVKKRFSKLIGASLDTP LMVKCYPQIIEGQIVFLQFCGAAEPTPETPEDWVMIGVWNSENQRVLVQRDQRCDQSRRILQHSPLVKEACLEKLEAGKL YRYQCQREGITVTIVGVEVVEGEEGKIVQEAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31090; Mature: 30958
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSATIDKLNQLKVQLKQCNNDTAALLLKRTIAKLESQLQREQLTTQSAKIPSKEIPKVS CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHH QAIFKQQSLVQDKKVVPQQQQITKNLQAKSKQRNHRKKRRPLLPGNGTHRAWCRIPGIIR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEE VQEVEGEGEQPVYFIELDGHQLPLRVKKRFSKLIGASLDTPLMVKCYPQIIEGQIVFLQF EEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEE CGAAEPTPETPEDWVMIGVWNSENQRVLVQRDQRCDQSRRILQHSPLVKEACLEKLEAGK CCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LYRYQCQREGITVTIVGVEVVEGEEGKIVQEAS EEEEECCCCCEEEEEEEEEEEECCCCCEEECCC >Mature Secondary Structure PSATIDKLNQLKVQLKQCNNDTAALLLKRTIAKLESQLQREQLTTQSAKIPSKEIPKVS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHH QAIFKQQSLVQDKKVVPQQQQITKNLQAKSKQRNHRKKRRPLLPGNGTHRAWCRIPGIIR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEE VQEVEGEGEQPVYFIELDGHQLPLRVKKRFSKLIGASLDTPLMVKCYPQIIEGQIVFLQF EEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEE CGAAEPTPETPEDWVMIGVWNSENQRVLVQRDQRCDQSRRILQHSPLVKEACLEKLEAGK CCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LYRYQCQREGITVTIVGVEVVEGEEGKIVQEAS EEEEECCCCCEEEEEEEEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA