Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340499
Identifier: 158340499
GI number: 158340499
Start: 50837
End: 51295
Strand: Direct
Name: 158340499
Synonym: AM1_C0044
Alternate gene names: NA
Gene position: 50837-51295 (Clockwise)
Preceding gene: 158340498
Following gene: 158340500
Centisome position: 18.61
GC content: 32.9
Gene sequence:
>459_bases ATGAAAAGTACTGAATTAAAAACAGGAAGAACTTTTGGTGTTACTTTTGAACATCAATCAGATTTTTTTCAAGAGCTTTC AAGCTTTTGTAAAGAGAATCAAGTACAGCAAGGATATATCCCCATGTTTATTGCTGGATTCTCCGAAGTAGAATTAGTGG GAACTTGCAGCAAAATTGATGATGTCAATGCTCCAGTATGGGATAAGGTACACTTAAGCAATGTAGAAGCTTGTGGATGT GGTACTATTGCCTATGATTCTGACGAAGATAAAATATCTCCACATATTCATGTTAATACTGGTATAAAAAGTTATTCTGC TTCTGGACATACCAGTCATTTATTAAGTGCTAAGGTTCTTTTTTTGGTTGAAATGCTTATTGTAGAAGTTCTACAACCTG ACATGAGAAGAGTTGTTGATCCAAATTTATATAATATTGGATTACTTCAGTTTATTTAA
Upstream 100 bases:
>100_bases TCCTTCTTTTCTGATATTGAACATCAAATCAATTACTTAAAGAGAATTAGTTGCTCAACATCTGTTAAAGAATTTCTTGG TATATTGCCTAATTGAATAT
Downstream 100 bases:
>100_bases TTACCCTAAAAACTATTCTACTTCTTGGGCTTAATGAAATGAAAGTAGGTTTTATTCAATTCTCACCTATTCTCGGTAAG CCAACTCAAACTTTAGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKSTELKTGRTFGVTFEHQSDFFQELSSFCKENQVQQGYIPMFIAGFSEVELVGTCSKIDDVNAPVWDKVHLSNVEACGC GTIAYDSDEDKISPHIHVNTGIKSYSASGHTSHLLSAKVLFLVEMLIVEVLQPDMRRVVDPNLYNIGLLQFI
Sequences:
>Translated_152_residues MKSTELKTGRTFGVTFEHQSDFFQELSSFCKENQVQQGYIPMFIAGFSEVELVGTCSKIDDVNAPVWDKVHLSNVEACGC GTIAYDSDEDKISPHIHVNTGIKSYSASGHTSHLLSAKVLFLVEMLIVEVLQPDMRRVVDPNLYNIGLLQFI >Mature_152_residues MKSTELKTGRTFGVTFEHQSDFFQELSSFCKENQVQQGYIPMFIAGFSEVELVGTCSKIDDVNAPVWDKVHLSNVEACGC GTIAYDSDEDKISPHIHVNTGIKSYSASGHTSHLLSAKVLFLVEMLIVEVLQPDMRRVVDPNLYNIGLLQFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16944; Mature: 16944
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTELKTGRTFGVTFEHQSDFFQELSSFCKENQVQQGYIPMFIAGFSEVELVGTCSKID CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCHHHC DVNAPVWDKVHLSNVEACGCGTIAYDSDEDKISPHIHVNTGIKSYSASGHTSHLLSAKVL CCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH FLVEMLIVEVLQPDMRRVVDPNLYNIGLLQFI HHHHHHHHHHHCHHHHHHCCCCCEECHHHCCC >Mature Secondary Structure MKSTELKTGRTFGVTFEHQSDFFQELSSFCKENQVQQGYIPMFIAGFSEVELVGTCSKID CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCHHHC DVNAPVWDKVHLSNVEACGCGTIAYDSDEDKISPHIHVNTGIKSYSASGHTSHLLSAKVL CCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH FLVEMLIVEVLQPDMRRVVDPNLYNIGLLQFI HHHHHHHHHHHCHHHHHHCCCCCEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA