Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340498
Identifier: 158340498
GI number: 158340498
Start: 49780
End: 50832
Strand: Direct
Name: 158340498
Synonym: AM1_C0043
Alternate gene names: NA
Gene position: 49780-50832 (Clockwise)
Preceding gene: 158340478
Following gene: 158340499
Centisome position: 18.23
GC content: 31.24
Gene sequence:
>1053_bases ATGGATAAAGAGTGGGATCTTCAAAGATTGTACTCTGATTTAGAGATGGTGAATAAACAGAGCTTGTCAAATAGTGCCAA GCAATACTTAGAATACATTTTGTTGGGTCAATCTCCATCGAATATTGCTGAAACTTTAAATCCTGAAAGCAGACAATCAT CAGGGACTATTAGAACGGTTTTATCAAGAGATGTTTATCCTAGTTTAATTTTATTATTAAACCTGCCAGAAGATTATAGA ATGCGCTGGAACAAAGTTCCAATGTTGCTAAGTCAGTATAAAATCGCAAAGAGAGAAGCTTGTTCATCATCGCCTTCTTA TATTCACTATGAAAAGAATCAGAATAGCTATGTTGGCTCCTGCCAGATCAAGTCAGATATTATAAATGGGCTTCTAAAAA AGTATTTTCTAAAAAAGGGTTTCACTGAAGATTTTCTCAGCTCTAACACAAAAAGTATGAGTTTTAGAAGTGAGTGGCAA ACAATTGTTAATAAGCTTGTGAGTGAAACAAGAGAAACTTTACTAGCGATGGTCTTAGATACTGAACTAAAGAAATGGTG GTCATCAATCGCAGGAATGATGTATATGGCAACTAATGTCAATCTACTAAAAAATGGGGTTAAAATTAAACGAATATTTA TATTAAACTCATTAGACTTTAGGATAAGAAATAATGCTATTATGAATGCATATTTGCATGAAAAGATGGGAGTCGAAGTT AAAATTCTAGACAATATTGATTGCAAAATTAAAATGTTTATCGATGCAGATATGATATCTGTACATGATAAAGAATTGAT AGCTTTATATTATCTTTCTGAAGATTGTGAGATTACGGAACTTCTTTTAGACTATTGTTCTATTTCAGCCTTTAGCTCTT TCTATGATGAATTATTTGATGATGATAGATTGTGTGAAAATGTTGATAAAATAATATCAAATAGCAATTTGAGTAGCTCC TTCTTTTCTGATATTGAACATCAAATCAATTACTTAAAGAGAATTAGTTGCTCAACATCTGTTAAAGAATTTCTTGGTAT ATTGCCTAATTGA
Upstream 100 bases:
>100_bases TAACTATACAACTATTTATATGATACTCTTGTATTGAAATTATTGATTTCTATTATGGAGTATGGAAATACCCTATTCTC AACATAGGAATACTTCACCA
Downstream 100 bases:
>100_bases ATATATGAAAAGTACTGAATTAAAAACAGGAAGAACTTTTGGTGTTACTTTTGAACATCAATCAGATTTTTTTCAAGAGC TTTCAAGCTTTTGTAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MDKEWDLQRLYSDLEMVNKQSLSNSAKQYLEYILLGQSPSNIAETLNPESRQSSGTIRTVLSRDVYPSLILLLNLPEDYR MRWNKVPMLLSQYKIAKREACSSSPSYIHYEKNQNSYVGSCQIKSDIINGLLKKYFLKKGFTEDFLSSNTKSMSFRSEWQ TIVNKLVSETRETLLAMVLDTELKKWWSSIAGMMYMATNVNLLKNGVKIKRIFILNSLDFRIRNNAIMNAYLHEKMGVEV KILDNIDCKIKMFIDADMISVHDKELIALYYLSEDCEITELLLDYCSISAFSSFYDELFDDDRLCENVDKIISNSNLSSS FFSDIEHQINYLKRISCSTSVKEFLGILPN
Sequences:
>Translated_350_residues MDKEWDLQRLYSDLEMVNKQSLSNSAKQYLEYILLGQSPSNIAETLNPESRQSSGTIRTVLSRDVYPSLILLLNLPEDYR MRWNKVPMLLSQYKIAKREACSSSPSYIHYEKNQNSYVGSCQIKSDIINGLLKKYFLKKGFTEDFLSSNTKSMSFRSEWQ TIVNKLVSETRETLLAMVLDTELKKWWSSIAGMMYMATNVNLLKNGVKIKRIFILNSLDFRIRNNAIMNAYLHEKMGVEV KILDNIDCKIKMFIDADMISVHDKELIALYYLSEDCEITELLLDYCSISAFSSFYDELFDDDRLCENVDKIISNSNLSSS FFSDIEHQINYLKRISCSTSVKEFLGILPN >Mature_350_residues MDKEWDLQRLYSDLEMVNKQSLSNSAKQYLEYILLGQSPSNIAETLNPESRQSSGTIRTVLSRDVYPSLILLLNLPEDYR MRWNKVPMLLSQYKIAKREACSSSPSYIHYEKNQNSYVGSCQIKSDIINGLLKKYFLKKGFTEDFLSSNTKSMSFRSEWQ TIVNKLVSETRETLLAMVLDTELKKWWSSIAGMMYMATNVNLLKNGVKIKRIFILNSLDFRIRNNAIMNAYLHEKMGVEV KILDNIDCKIKMFIDADMISVHDKELIALYYLSEDCEITELLLDYCSISAFSSFYDELFDDDRLCENVDKIISNSNLSSS FFSDIEHQINYLKRISCSTSVKEFLGILPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40533; Mature: 40533
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKEWDLQRLYSDLEMVNKQSLSNSAKQYLEYILLGQSPSNIAETLNPESRQSSGTIRTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHH LSRDVYPSLILLLNLPEDYRMRWNKVPMLLSQYKIAKREACSSSPSYIHYEKNQNSYVGS HHHCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEE CQIKSDIINGLLKKYFLKKGFTEDFLSSNTKSMSFRSEWQTIVNKLVSETRETLLAMVLD EEEHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TELKKWWSSIAGMMYMATNVNLLKNGVKIKRIFILNSLDFRIRNNAIMNAYLHEKMGVEV HHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEEECCCEEECCCHHHHHHHHHHHCCEE KILDNIDCKIKMFIDADMISVHDKELIALYYLSEDCEITELLLDYCSISAFSSFYDELFD EEECCCCEEEEEEEECCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC DDRLCENVDKIISNSNLSSSFFSDIEHQINYLKRISCSTSVKEFLGILPN CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDKEWDLQRLYSDLEMVNKQSLSNSAKQYLEYILLGQSPSNIAETLNPESRQSSGTIRTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHH LSRDVYPSLILLLNLPEDYRMRWNKVPMLLSQYKIAKREACSSSPSYIHYEKNQNSYVGS HHHCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEE CQIKSDIINGLLKKYFLKKGFTEDFLSSNTKSMSFRSEWQTIVNKLVSETRETLLAMVLD EEEHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TELKKWWSSIAGMMYMATNVNLLKNGVKIKRIFILNSLDFRIRNNAIMNAYLHEKMGVEV HHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEEECCCEEECCCHHHHHHHHHHHCCEE KILDNIDCKIKMFIDADMISVHDKELIALYYLSEDCEITELLLDYCSISAFSSFYDELFD EEECCCCEEEEEEEECCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC DDRLCENVDKIISNSNLSSSFFSDIEHQINYLKRISCSTSVKEFLGILPN CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA