Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340497
Identifier: 158340497
GI number: 158340497
Start: 48768
End: 49229
Strand: Reverse
Name: 158340497
Synonym: AM1_C0042
Alternate gene names: NA
Gene position: 49229-48768 (Counterclockwise)
Preceding gene: 158340501
Following gene: 158340496
Centisome position: 18.02
GC content: 38.53
Gene sequence:
>462_bases ATGAGCTATTCAAAAGTTGATAATTCATTCACCAATCTGAAACTATCAGATATAACTCTTGATAATGAAATACAATCTTA TCAACAACTGATTCAAGAGGTTGTTGGTGAATTTGCTGAGGCAATGAGGCAAGGGGCTAAGTTTCCACCAGTGGTTGTTT TTTTTGATGGCGATAATTACTGGTTAGCGGATGGATTGCATCGATTTCTGGCTAAGCAGTTTGTAGCTGAACAAAGTATT TCGACTGAGGTGCAGCCTGGTTCTCGTTACGATGCAAATTTTTACTCAGCACGTTCCAATTTGAATCCTAGTGATATACA TAGCAGTGAAGAAAAACACAGATTTTTTGAGAACATCTTGTATGATGGCCAAAGTGAGCCTCTACAATACTTGGACCAAT CACCAAATCGCTCTAGAAGGAAGAGAGGACAGACTATTGCAACAAATATACGGACACTTTAG
Upstream 100 bases:
>100_bases TCAATGAGTTATACAGCTTTAGAATTCATCAATCAGGAGATTAAGGCCCTGCATGCTTCAGTCTTCAACTTATATCTTTT TGTATTAGGAGTTTAAATTA
Downstream 100 bases:
>100_bases CTAACATATCTTAATAAAAGACTTGTAATTCTCTCAATTGTCTATTGCCAGGAAGGTTTAGATGTTTAGATAGCGATATA TTGTTGTCTACCACTAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSYSKVDNSFTNLKLSDITLDNEIQSYQQLIQEVVGEFAEAMRQGAKFPPVVVFFDGDNYWLADGLHRFLAKQFVAEQSI STEVQPGSRYDANFYSARSNLNPSDIHSSEEKHRFFENILYDGQSEPLQYLDQSPNRSRRKRGQTIATNIRTL
Sequences:
>Translated_153_residues MSYSKVDNSFTNLKLSDITLDNEIQSYQQLIQEVVGEFAEAMRQGAKFPPVVVFFDGDNYWLADGLHRFLAKQFVAEQSI STEVQPGSRYDANFYSARSNLNPSDIHSSEEKHRFFENILYDGQSEPLQYLDQSPNRSRRKRGQTIATNIRTL >Mature_152_residues SYSKVDNSFTNLKLSDITLDNEIQSYQQLIQEVVGEFAEAMRQGAKFPPVVVFFDGDNYWLADGLHRFLAKQFVAEQSIS TEVQPGSRYDANFYSARSNLNPSDIHSSEEKHRFFENILYDGQSEPLQYLDQSPNRSRRKRGQTIATNIRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17622; Mature: 17490
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSKVDNSFTNLKLSDITLDNEIQSYQQLIQEVVGEFAEAMRQGAKFPPVVVFFDGDNY CCCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCE WLADGLHRFLAKQFVAEQSISTEVQPGSRYDANFYSARSNLNPSDIHSSEEKHRFFENIL EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCHHHHHHHHHHH YDGQSEPLQYLDQSPNRSRRKRGQTIATNIRTL CCCCCCHHHHHCCCCCHHHHHCCCHHHHHCCCC >Mature Secondary Structure SYSKVDNSFTNLKLSDITLDNEIQSYQQLIQEVVGEFAEAMRQGAKFPPVVVFFDGDNY CCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCE WLADGLHRFLAKQFVAEQSISTEVQPGSRYDANFYSARSNLNPSDIHSSEEKHRFFENIL EHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHCCCCHHHHHHHHHHH YDGQSEPLQYLDQSPNRSRRKRGQTIATNIRTL CCCCCCHHHHHCCCCCHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA