Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340496
Identifier: 158340496
GI number: 158340496
Start: 47591
End: 48616
Strand: Reverse
Name: 158340496
Synonym: AM1_C0041
Alternate gene names: NA
Gene position: 48616-47591 (Counterclockwise)
Preceding gene: 158340497
Following gene: 158340495
Centisome position: 17.8
GC content: 43.76
Gene sequence:
>1026_bases ATGGATGGCGGTACCCAACCTCGCGCTCAATTATTTGAAGAAGTGGTTGCTGAATATGCTGAAGACATGAAGCAAGGTGC AATTTTCCCTCCAGTTATCGTCTATTACGATGGAGAAGAGTATTGGTTAGCTGATGGTTTCCATAGAGTACGCGCTAGAG AAACCATAGGATCAAAAGATGTAACTGCTGATGTGCGTCTCGGAACACAGCGAGATGCTGTCCTATACGCAGTTGGAGCT AATGCAGCGCATGGACTTCGAAGAACAAATGCAGACAAGCATCGGGCTGTTAAAAGGTTACTTCGTGATAAGGAATGGAT GAAATGGAGTGATCGAGAAATAGCGAGGCGTTGTGGAGTCGCAAACAGTTTTGTTGGACGTATCCGTAAAAGTCTATCCG TTCCTGAAGAACAGATAAACCATGACGCAGAAGGACTAGATTTAGACCCTTCCGTACGCCTGGCGAAAAGAGGTGGAACT ATTTTCGAGATGGACACAACAAATATCCGCGATAGACCTCAAACTGAACAGAAGAAGTCTATTAAGCGCTCACGAGCAAA GAAACAACCTGTTTCTCCTAAGCCCCTTGAGGGAAAACCCATAGAAGTTAAAGAGGGGGATACCTGGAAACTAGGTAAAT CTCATTACTTGTTTTGCGGGGAAGGTTCATCTAGGAAGTTTCTAAAACTTTTCCCACCTGAAGTAGCATTACTTCTATAT TTTCCACGGCAGAGAGAAGATTGGACACAGGCCATAACGCTACAAGCTAGAAGTACGCTGCTATTTCACACCTTCTACGG AGAAGATATAGATCTAAAAAATCTGAGAAAAATTATTGAAAACTGTCTTTCCACTACAACGGATGCCGATGATTCCATAG TAGTTATCAATCTTGCAGATCCTTTGCTCTTTATCTTAATGGAGAGTTTATTCTGCTCCTGTTACTGTGCTGAGCCAGAT CCTCAGCGATGCACAGACGCTCTCGCTGCTTGGGCCGCAATCAAGCAACCAGTGAAAAAGCTATAA
Upstream 100 bases:
>100_bases GAAGGTTTAGATGTTTAGATAGCGATATATTGTTGTCTACCACTAGCTCTTGATGCCATCCGAACCTTCTATTCAGTCCG TGGACATAGCAAAAATCTGC
Downstream 100 bases:
>100_bases ACTCGAAGGAGGATAATGCGTTAAAAAACTTTGCAGAAAGCATATTTGTATTTAGAAAAGGCTAATGATCACCTATCAGT TTTGCGGTAAGATTGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: ParB-Like Nuclease Domain Family; ParB-Like Nuclease; ParB Domain Protein Nuclease
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDGGTQPRAQLFEEVVAEYAEDMKQGAIFPPVIVYYDGEEYWLADGFHRVRARETIGSKDVTADVRLGTQRDAVLYAVGA NAAHGLRRTNADKHRAVKRLLRDKEWMKWSDREIARRCGVANSFVGRIRKSLSVPEEQINHDAEGLDLDPSVRLAKRGGT IFEMDTTNIRDRPQTEQKKSIKRSRAKKQPVSPKPLEGKPIEVKEGDTWKLGKSHYLFCGEGSSRKFLKLFPPEVALLLY FPRQREDWTQAITLQARSTLLFHTFYGEDIDLKNLRKIIENCLSTTTDADDSIVVINLADPLLFILMESLFCSCYCAEPD PQRCTDALAAWAAIKQPVKKL
Sequences:
>Translated_341_residues MDGGTQPRAQLFEEVVAEYAEDMKQGAIFPPVIVYYDGEEYWLADGFHRVRARETIGSKDVTADVRLGTQRDAVLYAVGA NAAHGLRRTNADKHRAVKRLLRDKEWMKWSDREIARRCGVANSFVGRIRKSLSVPEEQINHDAEGLDLDPSVRLAKRGGT IFEMDTTNIRDRPQTEQKKSIKRSRAKKQPVSPKPLEGKPIEVKEGDTWKLGKSHYLFCGEGSSRKFLKLFPPEVALLLY FPRQREDWTQAITLQARSTLLFHTFYGEDIDLKNLRKIIENCLSTTTDADDSIVVINLADPLLFILMESLFCSCYCAEPD PQRCTDALAAWAAIKQPVKKL >Mature_341_residues MDGGTQPRAQLFEEVVAEYAEDMKQGAIFPPVIVYYDGEEYWLADGFHRVRARETIGSKDVTADVRLGTQRDAVLYAVGA NAAHGLRRTNADKHRAVKRLLRDKEWMKWSDREIARRCGVANSFVGRIRKSLSVPEEQINHDAEGLDLDPSVRLAKRGGT IFEMDTTNIRDRPQTEQKKSIKRSRAKKQPVSPKPLEGKPIEVKEGDTWKLGKSHYLFCGEGSSRKFLKLFPPEVALLLY FPRQREDWTQAITLQARSTLLFHTFYGEDIDLKNLRKIIENCLSTTTDADDSIVVINLADPLLFILMESLFCSCYCAEPD PQRCTDALAAWAAIKQPVKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38716; Mature: 38716
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGGTQPRAQLFEEVVAEYAEDMKQGAIFPPVIVYYDGEEYWLADGFHRVRARETIGSKD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHCCCCC VTADVRLGTQRDAVLYAVGANAAHGLRRTNADKHRAVKRLLRDKEWMKWSDREIARRCGV CEEEEEECCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHCCHHHHCCCHHHHHHHCCC ANSFVGRIRKSLSVPEEQINHDAEGLDLDPSVRLAKRGGTIFEMDTTNIRDRPQTEQKKS HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHHH IKRSRAKKQPVSPKPLEGKPIEVKEGDTWKLGKSHYLFCGEGSSRKFLKLFPPEVALLLY HHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCEEEEECCCCCCCEEEECCCCEEEEEE FPRQREDWTQAITLQARSTLLFHTFYGEDIDLKNLRKIIENCLSTTTDADDSIVVINLAD CCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCH PLLFILMESLFCSCYCAEPDPQRCTDALAAWAAIKQPVKKL HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDGGTQPRAQLFEEVVAEYAEDMKQGAIFPPVIVYYDGEEYWLADGFHRVRARETIGSKD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHCCCCC VTADVRLGTQRDAVLYAVGANAAHGLRRTNADKHRAVKRLLRDKEWMKWSDREIARRCGV CEEEEEECCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHCCHHHHCCCHHHHHHHCCC ANSFVGRIRKSLSVPEEQINHDAEGLDLDPSVRLAKRGGTIFEMDTTNIRDRPQTEQKKS HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHHH IKRSRAKKQPVSPKPLEGKPIEVKEGDTWKLGKSHYLFCGEGSSRKFLKLFPPEVALLLY HHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCEEEEECCCCCCCEEEECCCCEEEEEE FPRQREDWTQAITLQARSTLLFHTFYGEDIDLKNLRKIIENCLSTTTDADDSIVVINLAD CCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCH PLLFILMESLFCSCYCAEPDPQRCTDALAAWAAIKQPVKKL HHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA