Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340493
Identifier: 158340493
GI number: 158340493
Start: 41050
End: 42276
Strand: Reverse
Name: 158340493
Synonym: AM1_C0038
Alternate gene names: NA
Gene position: 42276-41050 (Counterclockwise)
Preceding gene: 158340494
Following gene: 158340492
Centisome position: 15.48
GC content: 50.45
Gene sequence:
>1227_bases ATGCAAGTTGCGATCGCAAAAATCGGAGATGCAACTCTCCTCGTCACCCCGGACGGTAAGCCCGTACCTCACAAGGATAC CGAACAACCCACCTTCCATATCCAACCTCAACTGTTTAATCCTTATTGCGATATCGGTCTGAGTGATATTTCCCTGGTTG GAGCCACTATCGCTCCCCATGATTCCACTAAACCTGTCTCAGTCTTACCCAAAGACGTAACGATTCGACAGCCCTATCCC AACGAAAACTATTACGTCGCGGGGATGGCTGAGCGGAAGATGGGCTGGGATATTCCATTGGATTTGGATGCGGCCCCTAA GTGGTTGGATCTGACTTGGGAGGTACGAACACCTTCAGACATAGAACACTCAATTTTGACGATCTATCATCGATTTACTT TAGAGTTCATCCTTACCCAACAAGGCCAAGTATTCTCAATGGATCAGGCCAATACTTTTTATGATCCGAATGCCCGTACC ATCAGCCATATCAGTCTCAATCATATCGACGACAGCTTTACCAAAGGCGACAAGTCCTTTAAGTCCTATCGGATGGATTC CCCTCACGGCTTGGCATTCTACCAGACCTTGATCCTCAACTCTTGTGCCTGGTCAGACCTGATCTGCACCGCCCAGGAGG ACGTTACCTTATTGCGGGATATTGAACCTGCTCAAAGCTTCCAAACTCACATTGACCTACATCGCCAGAATGCTTGCATT GAAATTCCAGCGGATGTTCTCCATCAAGCTATCTGTGACACCCAGGTTGAGGTCGATTTTGAGATCGGAGAGTATGACCG TTCTCCAGGTCTTCAACGGCTTTGTCGCTGGTGGAACGAGAATGCTCCCGTTGTAGGAACCCGCAGAGCTGCCTTTATTG CGCTGTGGTGTCGTGTAGAAGATGACGATTGGTATTGGTCCGGTTGGGACGAGTGCCCGGAATGGGGTGTGGAGAATATT CAGCGGTATGGCCTTCAAGACCGCTGCGCCCGATGGAACGATTTTGTAATTCTGGAGTTTTTCCCACGCCAGGTGAGCCG ATTGGAGGTTGCCCAAGGAGCCTCGACCGAAATTCTAGGCGTAGATGGCAAGGGCTATACCGATACGGGCTTGGCGCGTG AGGACGTTGACGAAGCCTATCACGCCCACTATTCACTCCAAGCTTTCCCCAAGCGATTCCCCTTTGCCTGGAAGACGCTA CAAGCCGCAGTTCATACCCCTGCATAA
Upstream 100 bases:
>100_bases AACTGCTGCTTAGGTAGCCATTGTCGGAGTTTCAGTTTATCTAAACCCATCAGATTATCTAAACCCATCAGAAAAGCATT CACGCCACAAGGAGAAAAGA
Downstream 100 bases:
>100_bases CGTCCACCCACTTCAGCCTTGCATGGAGGACGAACCATGACCGACAGGAACTCTTCAGACCATAACCTTCAGCCAAACCC AATCCTTAGCCATGCCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MQVAIAKIGDATLLVTPDGKPVPHKDTEQPTFHIQPQLFNPYCDIGLSDISLVGATIAPHDSTKPVSVLPKDVTIRQPYP NENYYVAGMAERKMGWDIPLDLDAAPKWLDLTWEVRTPSDIEHSILTIYHRFTLEFILTQQGQVFSMDQANTFYDPNART ISHISLNHIDDSFTKGDKSFKSYRMDSPHGLAFYQTLILNSCAWSDLICTAQEDVTLLRDIEPAQSFQTHIDLHRQNACI EIPADVLHQAICDTQVEVDFEIGEYDRSPGLQRLCRWWNENAPVVGTRRAAFIALWCRVEDDDWYWSGWDECPEWGVENI QRYGLQDRCARWNDFVILEFFPRQVSRLEVAQGASTEILGVDGKGYTDTGLAREDVDEAYHAHYSLQAFPKRFPFAWKTL QAAVHTPA
Sequences:
>Translated_408_residues MQVAIAKIGDATLLVTPDGKPVPHKDTEQPTFHIQPQLFNPYCDIGLSDISLVGATIAPHDSTKPVSVLPKDVTIRQPYP NENYYVAGMAERKMGWDIPLDLDAAPKWLDLTWEVRTPSDIEHSILTIYHRFTLEFILTQQGQVFSMDQANTFYDPNART ISHISLNHIDDSFTKGDKSFKSYRMDSPHGLAFYQTLILNSCAWSDLICTAQEDVTLLRDIEPAQSFQTHIDLHRQNACI EIPADVLHQAICDTQVEVDFEIGEYDRSPGLQRLCRWWNENAPVVGTRRAAFIALWCRVEDDDWYWSGWDECPEWGVENI QRYGLQDRCARWNDFVILEFFPRQVSRLEVAQGASTEILGVDGKGYTDTGLAREDVDEAYHAHYSLQAFPKRFPFAWKTL QAAVHTPA >Mature_408_residues MQVAIAKIGDATLLVTPDGKPVPHKDTEQPTFHIQPQLFNPYCDIGLSDISLVGATIAPHDSTKPVSVLPKDVTIRQPYP NENYYVAGMAERKMGWDIPLDLDAAPKWLDLTWEVRTPSDIEHSILTIYHRFTLEFILTQQGQVFSMDQANTFYDPNART ISHISLNHIDDSFTKGDKSFKSYRMDSPHGLAFYQTLILNSCAWSDLICTAQEDVTLLRDIEPAQSFQTHIDLHRQNACI EIPADVLHQAICDTQVEVDFEIGEYDRSPGLQRLCRWWNENAPVVGTRRAAFIALWCRVEDDDWYWSGWDECPEWGVENI QRYGLQDRCARWNDFVILEFFPRQVSRLEVAQGASTEILGVDGKGYTDTGLAREDVDEAYHAHYSLQAFPKRFPFAWKTL QAAVHTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46551; Mature: 46551
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVAIAKIGDATLLVTPDGKPVPHKDTEQPTFHIQPQLFNPYCDIGLSDISLVGATIAPH CEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHEEEEEECCC DSTKPVSVLPKDVTIRQPYPNENYYVAGMAERKMGWDIPLDLDAAPKWLDLTWEVRTPSD CCCCCCEECCCCEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC IEHSILTIYHRFTLEFILTQQGQVFSMDQANTFYDPNARTISHISLNHIDDSFTKGDKSF HHHHHHHHHHHHEEEEEEECCCCEEEECCCCCEECCCCCEEEEEEECCCCCHHHCCCHHH KSYRMDSPHGLAFYQTLILNSCAWSDLICTAQEDVTLLRDIEPAQSFQTHIDLHRQNACI HHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHCCCCEE EIPADVLHQAICDTQVEVDFEIGEYDRSPGLQRLCRWWNENAPVVGTRRAAFIALWCRVE ECCHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCEEEEEEEEEEE DDDWYWSGWDECPEWGVENIQRYGLQDRCARWNDFVILEFFPRQVSRLEVAQGASTEILG CCCCEECCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCEEEE VDGKGYTDTGLAREDVDEAYHAHYSLQAFPKRFPFAWKTLQAAVHTPA CCCCCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MQVAIAKIGDATLLVTPDGKPVPHKDTEQPTFHIQPQLFNPYCDIGLSDISLVGATIAPH CEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHEEEEEECCC DSTKPVSVLPKDVTIRQPYPNENYYVAGMAERKMGWDIPLDLDAAPKWLDLTWEVRTPSD CCCCCCEECCCCEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC IEHSILTIYHRFTLEFILTQQGQVFSMDQANTFYDPNARTISHISLNHIDDSFTKGDKSF HHHHHHHHHHHHEEEEEEECCCCEEEECCCCCEECCCCCEEEEEEECCCCCHHHCCCHHH KSYRMDSPHGLAFYQTLILNSCAWSDLICTAQEDVTLLRDIEPAQSFQTHIDLHRQNACI HHHCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHCCCCEE EIPADVLHQAICDTQVEVDFEIGEYDRSPGLQRLCRWWNENAPVVGTRRAAFIALWCRVE ECCHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCEEEEEEEEEEE DDDWYWSGWDECPEWGVENIQRYGLQDRCARWNDFVILEFFPRQVSRLEVAQGASTEILG CCCCEECCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCEEEE VDGKGYTDTGLAREDVDEAYHAHYSLQAFPKRFPFAWKTLQAAVHTPA CCCCCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA