Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340492
Identifier: 158340492
GI number: 158340492
Start: 40843
End: 41013
Strand: Reverse
Name: 158340492
Synonym: AM1_C0037
Alternate gene names: NA
Gene position: 41013-40843 (Counterclockwise)
Preceding gene: 158340493
Following gene: 158340491
Centisome position: 15.02
GC content: 52.05
Gene sequence:
>171_bases ATGACCGACAGGAACTCTTCAGACCATAACCTTCAGCCAAACCCAATCCTTAGCCATGCCCAGATATGGGGCAAAACGGG GCATGGCAAGGTCGCTCTTGCAATCTCAGACGAACACTCCCCAACACCCAGCCACCTCAAGATTAACTTCCATCCCAAAC CCTCTCGCTAA
Upstream 100 bases:
>100_bases TTTCCCCAAGCGATTCCCCTTTGCCTGGAAGACGCTACAAGCCGCAGTTCATACCCCTGCATAACGTCCACCCACTTCAG CCTTGCATGGAGGACGAACC
Downstream 100 bases:
>100_bases TTCCAGTCACCCTCTTGTAGGAGGTTTGACCCGATGACGACCACTACGATTGCTAGCCCCTTCTCAGACGGAATCCGTCT ACCCGAATATCTCGTTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MTDRNSSDHNLQPNPILSHAQIWGKTGHGKVALAISDEHSPTPSHLKINFHPKPSR
Sequences:
>Translated_56_residues MTDRNSSDHNLQPNPILSHAQIWGKTGHGKVALAISDEHSPTPSHLKINFHPKPSR >Mature_55_residues TDRNSSDHNLQPNPILSHAQIWGKTGHGKVALAISDEHSPTPSHLKINFHPKPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6202; Mature: 6071
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRNSSDHNLQPNPILSHAQIWGKTGHGKVALAISDEHSPTPSHLKINFHPKPSR CCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TDRNSSDHNLQPNPILSHAQIWGKTGHGKVALAISDEHSPTPSHLKINFHPKPSR CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA