Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340490
Identifier: 158340490
GI number: 158340490
Start: 38129
End: 38680
Strand: Reverse
Name: 158340490
Synonym: AM1_C0035
Alternate gene names: NA
Gene position: 38680-38129 (Counterclockwise)
Preceding gene: 158340491
Following gene: 158340489
Centisome position: 14.16
GC content: 53.99
Gene sequence:
>552_bases ATGAAACGACTCAAGATCCTTTACGAAAAAACCTCAAAACAGCCCTGGTGGTTTGGCTATAGTGGCTTTCTTATCATCGG CCTGATCTACAATCTGCCCTGGCTACAAGCGACCTCTCTCGCCTGTCTCGCCATCACAGCATCAGCCATCGCTTGGCGCA GAATTATCCGCAGATCTCCCCATGTCCTCGCGGGCCTGCAAACCGTGAGCATCACCATCGGCTATCAGCAATATGCCCAA GCGCAACTGAACGTACCCGATTCCGTCTGTAATGGCTTCGACGTTATCCCAGGTTTTGGGAAGGCCATGATTGGGGGCTT GGGTTGGCTGAATGTCCAAGGGTTCTCCTTGGCGGGAGCCGTCTGCGGGATTGGCTGGCTGATCCTCGCGGGTGTGGTTC TCGGTGCCATTGGCTTTGCGGGTAAGAACAGTTTGGGCCACTCTCATCATGGTGGGGATATTCAAGAGATGTCCCGCCCC GTGGTGGGACTCCTCTACTTCATCATCGTCATGATCATGATTGGTGCCCTGATTTTTGCGGCAACCCGATAA
Upstream 100 bases:
>100_bases CAGCAAAGCGGGCCAAAATCTCTCCTGACCAACTTCAGACCCTGCTCAACTACGCCCAGCAATAACCCCTAGATCCATTG ATCCATTAGAGGCAACTCCC
Downstream 100 bases:
>100_bases AGGAGGACAGCTATGGATTTTGAAGCCGTTAACGAAGGTCAAACACGAGATATCCTCTCCGTGAATACGATGCTAGACGG TATTCCCGTCTTTTACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKRLKILYEKTSKQPWWFGYSGFLIIGLIYNLPWLQATSLACLAITASAIAWRRIIRRSPHVLAGLQTVSITIGYQQYAQ AQLNVPDSVCNGFDVIPGFGKAMIGGLGWLNVQGFSLAGAVCGIGWLILAGVVLGAIGFAGKNSLGHSHHGGDIQEMSRP VVGLLYFIIVMIMIGALIFAATR
Sequences:
>Translated_183_residues MKRLKILYEKTSKQPWWFGYSGFLIIGLIYNLPWLQATSLACLAITASAIAWRRIIRRSPHVLAGLQTVSITIGYQQYAQ AQLNVPDSVCNGFDVIPGFGKAMIGGLGWLNVQGFSLAGAVCGIGWLILAGVVLGAIGFAGKNSLGHSHHGGDIQEMSRP VVGLLYFIIVMIMIGALIFAATR >Mature_183_residues MKRLKILYEKTSKQPWWFGYSGFLIIGLIYNLPWLQATSLACLAITASAIAWRRIIRRSPHVLAGLQTVSITIGYQQYAQ AQLNVPDSVCNGFDVIPGFGKAMIGGLGWLNVQGFSLAGAVCGIGWLILAGVVLGAIGFAGKNSLGHSHHGGDIQEMSRP VVGLLYFIIVMIMIGALIFAATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19734; Mature: 19734
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLKILYEKTSKQPWWFGYSGFLIIGLIYNLPWLQATSLACLAITASAIAWRRIIRRSP CCHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HVLAGLQTVSITIGYQQYAQAQLNVPDSVCNGFDVIPGFGKAMIGGLGWLNVQGFSLAGA HHHCCCEEEEEEECHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCEEEECCHHHHHH VCGIGWLILAGVVLGAIGFAGKNSLGHSHHGGDIQEMSRPVVGLLYFIIVMIMIGALIFA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATR CCC >Mature Secondary Structure MKRLKILYEKTSKQPWWFGYSGFLIIGLIYNLPWLQATSLACLAITASAIAWRRIIRRSP CCHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC HVLAGLQTVSITIGYQQYAQAQLNVPDSVCNGFDVIPGFGKAMIGGLGWLNVQGFSLAGA HHHCCCEEEEEEECHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCEEEECCHHHHHH VCGIGWLILAGVVLGAIGFAGKNSLGHSHHGGDIQEMSRPVVGLLYFIIVMIMIGALIFA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA