Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340488
Identifier: 158340488
GI number: 158340488
Start: 33829
End: 34980
Strand: Reverse
Name: 158340488
Synonym: AM1_C0033
Alternate gene names: NA
Gene position: 34980-33829 (Counterclockwise)
Preceding gene: 158340489
Following gene: 158340487
Centisome position: 12.81
GC content: 54.95
Gene sequence:
>1152_bases ATGCAGCCTAAACCTTTACTGATAACTCTGGTGCTGTCAGTTCAAGCTACCATCACCACCGTCCCCGCCTATGCTCAGGT GTCCTATGACGACCCCGTGATTAGCGGCGATATCACCTTACCGACTACCACCGCACCCACCACCTTCCCTGATGTGCCCA TCCCCACGGGGGATGTGACGATAGCCAAGGATAATCCTCTAGATACGGCCACCTATACGGAAGTACCCACGGCTCAGCTC CCTAGTGGTCTCCTCGGCACGGTCTTTAATGTCCTGGGACCCAAGCAGAAACCTGGACAAGCGAGGGTGATCAATGAGAC TCAACGCAAAATTCTCAAGGTCTATGAATATGGACAGAAAGCGCTTGATGCCTACAAGGTAGGCCGAGCCATTTATGACG CAATCGATAACTTCTCCCTGAAGCGGATCCTAAGCGGGTCCGTCTCGTCTATCCTCGCCAATTACGACAAGTTGGGCACC AACGGCACCAGCGGGAGCCAGCAAGGAGGCAGTGGATCTGAGGACCCCATTTATTCGGATCCCCAAGACCCCTTTCAGGT GTATACCCAAGCCCGCAACAACGAGGCCCGTAAAGCCTTACTCCCCCAACTGATGACTCAGCTCGTCTTTTCTGAAGATG GTCAAGCCTTGATTCAGCAGCAGGGAGAGCAGGTGCAGCAGTCCGTGGTTAACACCATTGAGTCCACACAAGCCCTCGTG CAGCTCAGTGCCGCTAGCAAAGAGCAAGCCACAGCGGGGGCTGGGATTGCGACCTCTGTTGGGGAGACGGGTCAGAAAGC CCAAACCCTCAAGTCCTCCCAAGCAGTCCTCAAGTCCCTCACCGCTCAAAACAGCCTGATGGCTCAAGGAACCGCAACCA ATGGAGCCATACTGAGCAACGTCGTATCGGGTCAAGAGGAGCAGAAGAAGTCCTCAGATGCCCTCGTGGTTGGCTCTGCC CTTGCCCATCAGCAGCGCACGACGGGGCTGCACTTAAGCGCCTCAGAACTCACTCTCCAAGAACAAATCCGAGCTGAACT GGAGCTATACAAAGATGAACGACACCGTGCCCAAGACCAGGCTGCTCTGCGGGAGCAGCTTAGCTTCAACTACCTCTACA TTCCTGGCTTATATTCAGAGACCACTCCCTAG
Upstream 100 bases:
>100_bases TATCCTGATGACCCCGTTGCGGGATTAGTGGACTTTGGTGATCAGCTCTCCCAGGCCAACAAACAAGGGATTGAGGTTGA AACCATTGGAGTGGAAGACC
Downstream 100 bases:
>100_bases AACGATAGTGTCCGTCATCGGTCTCACCCTACTGTTTATCGCCTTGGGTGAAGTGTCAGCCCATGCCATTAATGAGGACC TCGACCCTTCCGTGGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MQPKPLLITLVLSVQATITTVPAYAQVSYDDPVISGDITLPTTTAPTTFPDVPIPTGDVTIAKDNPLDTATYTEVPTAQL PSGLLGTVFNVLGPKQKPGQARVINETQRKILKVYEYGQKALDAYKVGRAIYDAIDNFSLKRILSGSVSSILANYDKLGT NGTSGSQQGGSGSEDPIYSDPQDPFQVYTQARNNEARKALLPQLMTQLVFSEDGQALIQQQGEQVQQSVVNTIESTQALV QLSAASKEQATAGAGIATSVGETGQKAQTLKSSQAVLKSLTAQNSLMAQGTATNGAILSNVVSGQEEQKKSSDALVVGSA LAHQQRTTGLHLSASELTLQEQIRAELELYKDERHRAQDQAALREQLSFNYLYIPGLYSETTP
Sequences:
>Translated_383_residues MQPKPLLITLVLSVQATITTVPAYAQVSYDDPVISGDITLPTTTAPTTFPDVPIPTGDVTIAKDNPLDTATYTEVPTAQL PSGLLGTVFNVLGPKQKPGQARVINETQRKILKVYEYGQKALDAYKVGRAIYDAIDNFSLKRILSGSVSSILANYDKLGT NGTSGSQQGGSGSEDPIYSDPQDPFQVYTQARNNEARKALLPQLMTQLVFSEDGQALIQQQGEQVQQSVVNTIESTQALV QLSAASKEQATAGAGIATSVGETGQKAQTLKSSQAVLKSLTAQNSLMAQGTATNGAILSNVVSGQEEQKKSSDALVVGSA LAHQQRTTGLHLSASELTLQEQIRAELELYKDERHRAQDQAALREQLSFNYLYIPGLYSETTP >Mature_383_residues MQPKPLLITLVLSVQATITTVPAYAQVSYDDPVISGDITLPTTTAPTTFPDVPIPTGDVTIAKDNPLDTATYTEVPTAQL PSGLLGTVFNVLGPKQKPGQARVINETQRKILKVYEYGQKALDAYKVGRAIYDAIDNFSLKRILSGSVSSILANYDKLGT NGTSGSQQGGSGSEDPIYSDPQDPFQVYTQARNNEARKALLPQLMTQLVFSEDGQALIQQQGEQVQQSVVNTIESTQALV QLSAASKEQATAGAGIATSVGETGQKAQTLKSSQAVLKSLTAQNSLMAQGTATNGAILSNVVSGQEEQKKSSDALVVGSA LAHQQRTTGLHLSASELTLQEQIRAELELYKDERHRAQDQAALREQLSFNYLYIPGLYSETTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40972; Mature: 40972
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKPLLITLVLSVQATITTVPAYAQVSYDDPVISGDITLPTTTAPTTFPDVPIPTGDVT CCCCCEEEEEEEHHHHHHEECCCEEEECCCCCEEECCEECCCCCCCCCCCCCCCCCCCEE IAKDNPLDTATYTEVPTAQLPSGLLGTVFNVLGPKQKPGQARVINETQRKILKVYEYGQK EECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ALDAYKVGRAIYDAIDNFSLKRILSGSVSSILANYDKLGTNGTSGSQQGGSGSEDPIYSD HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQDPFQVYTQARNNEARKALLPQLMTQLVFSEDGQALIQQQGEQVQQSVVNTIESTQALV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLSAASKEQATAGAGIATSVGETGQKAQTLKSSQAVLKSLTAQNSLMAQGTATNGAILSN HHHHCCHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH VVSGQEEQKKSSDALVVGSALAHQQRTTGLHLSASELTLQEQIRAELELYKDERHRAQDQ HHCCCHHHHHCCCEEEEHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH AALREQLSFNYLYIPGLYSETTP HHHHHHHCCCEEEECCCCCCCCC >Mature Secondary Structure MQPKPLLITLVLSVQATITTVPAYAQVSYDDPVISGDITLPTTTAPTTFPDVPIPTGDVT CCCCCEEEEEEEHHHHHHEECCCEEEECCCCCEEECCEECCCCCCCCCCCCCCCCCCCEE IAKDNPLDTATYTEVPTAQLPSGLLGTVFNVLGPKQKPGQARVINETQRKILKVYEYGQK EECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ALDAYKVGRAIYDAIDNFSLKRILSGSVSSILANYDKLGTNGTSGSQQGGSGSEDPIYSD HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQDPFQVYTQARNNEARKALLPQLMTQLVFSEDGQALIQQQGEQVQQSVVNTIESTQALV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLSAASKEQATAGAGIATSVGETGQKAQTLKSSQAVLKSLTAQNSLMAQGTATNGAILSN HHHHCCHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH VVSGQEEQKKSSDALVVGSALAHQQRTTGLHLSASELTLQEQIRAELELYKDERHRAQDQ HHCCCHHHHHCCCEEEEHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH AALREQLSFNYLYIPGLYSETTP HHHHHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA