Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340487
Identifier: 158340487
GI number: 158340487
Start: 32541
End: 33821
Strand: Reverse
Name: 158340487
Synonym: AM1_C0032
Alternate gene names: NA
Gene position: 33821-32541 (Counterclockwise)
Preceding gene: 158340488
Following gene: 158340486
Centisome position: 12.38
GC content: 55.04
Gene sequence:
>1281_bases GTGTCCGTCATCGGTCTCACCCTACTGTTTATCGCCTTGGGTGAAGTGTCAGCCCATGCCATTAATGAGGACCTCGACCC TTCCGTGGGTGTAGACCTGCTGCGGCAGTCCAAGATCCGCATGTTTGAGACCTCCCAATGGTGGGATGAGTTGTGGAATG ACATCCTCGGAGATAATCCCCGGACGACCGTCAATAACAAGGCGATGTTTAGCATCCTGCTGCCCTTTCTGCTCGTGGCC TGCCTCGTGCTGATGGCGAGAGCGGGATACAGCTTTTTGAGTGGGGAAACCCATCGGATTGTCTTGCAGCAGATCGTCCC CATCGTCTTACTCCTCGCCTTTACCCTCAACTATGGCTGGGGGGCGAAAGCCGTTGCCTGGAGTTTTCGGGAGGTGGCGA ATCGAGGGAGCGAACTGATCCTCGATTCCCAATGGGCGGGGCTAGTGGTCCGGGATGCCCTCAAGGACAAGATTCATGCG GCCTCAGCGATAGCCGAATATAACCGCCAGTCTGCGAGCTGTTCTCGTCTGCCAGCGATCACCCTCAGAGACCCCGCAGC CGCTTCTTCCAGTCAAGGACTGGACCAGGTTCAAGCCTCGAAAGTGCAAACCGCCGTGCGCTGCTTGGAGTTGTTAGCCC AAAAGCTGGAACGGGATGAGGCTGCCATCAAGAAAGACTGCCCGAGCTGTGAGACAGCTCAGCAAGTGATTGAAAGTCGT AAGAAAGGGATTCAAGCCGATCTAGGCCGCATTAGTGCCGCGATATTTAACACCTTGAACCCCATTGATGATGCCATACA TGGCTTCAACGTGGTTAAAGAGAATGCGGTACGGACCGTCTCTATTGAAGGTCCCCTCCAGATCCAATACTGGTTTGTCT CCGGCCAAGAACTGGCCTTGATTCTGTCAGGGATCTTAGCCCCAATCATGATCATCTATTCCACCCTACCGATAGCGGGT CATAAGTGGGCTGTTTTGCAGTACCTGAAAGCCCTGGTCATTATTGCCCTAGTGCGATTCGCCTATATCTTCGTGATTGG GTTTGGGGCGATCTATCTGACGGATAACCCCATCGCGGATCAAGGAGCCGCCTTTGCTACCTTCTTAGGCTATGTCGCCC CTGCAGTCGCCACGGCTGCGGTGACGGTGGGGGCATTAGCTGCATCAGGGGTCTATACGGGAGCTGTGGTGACCACCGTG GGAGCAGCAGTGACCGTTGTGTCATCCGCTGCCTTATCCGCGAGTTCAGCCGTCACCTCCAGAGCCTTGAGAAATCGATA A
Upstream 100 bases:
>100_bases CGACACCGTGCCCAAGACCAGGCTGCTCTGCGGGAGCAGCTTAGCTTCAACTACCTCTACATTCCTGGCTTATATTCAGA GACCACTCCCTAGAACGATA
Downstream 100 bases:
>100_bases CAGCCCCCTCATTCCCAATTGCAAGACCCATGCTAAAACTCCAAGATCCCACCGAAACCCACAAGAAGCAGCCCCCCTAT GTGCTGTATGCCATTTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSVIGLTLLFIALGEVSAHAINEDLDPSVGVDLLRQSKIRMFETSQWWDELWNDILGDNPRTTVNNKAMFSILLPFLLVA CLVLMARAGYSFLSGETHRIVLQQIVPIVLLLAFTLNYGWGAKAVAWSFREVANRGSELILDSQWAGLVVRDALKDKIHA ASAIAEYNRQSASCSRLPAITLRDPAAASSSQGLDQVQASKVQTAVRCLELLAQKLERDEAAIKKDCPSCETAQQVIESR KKGIQADLGRISAAIFNTLNPIDDAIHGFNVVKENAVRTVSIEGPLQIQYWFVSGQELALILSGILAPIMIIYSTLPIAG HKWAVLQYLKALVIIALVRFAYIFVIGFGAIYLTDNPIADQGAAFATFLGYVAPAVATAAVTVGALAASGVYTGAVVTTV GAAVTVVSSAALSASSAVTSRALRNR
Sequences:
>Translated_426_residues MSVIGLTLLFIALGEVSAHAINEDLDPSVGVDLLRQSKIRMFETSQWWDELWNDILGDNPRTTVNNKAMFSILLPFLLVA CLVLMARAGYSFLSGETHRIVLQQIVPIVLLLAFTLNYGWGAKAVAWSFREVANRGSELILDSQWAGLVVRDALKDKIHA ASAIAEYNRQSASCSRLPAITLRDPAAASSSQGLDQVQASKVQTAVRCLELLAQKLERDEAAIKKDCPSCETAQQVIESR KKGIQADLGRISAAIFNTLNPIDDAIHGFNVVKENAVRTVSIEGPLQIQYWFVSGQELALILSGILAPIMIIYSTLPIAG HKWAVLQYLKALVIIALVRFAYIFVIGFGAIYLTDNPIADQGAAFATFLGYVAPAVATAAVTVGALAASGVYTGAVVTTV GAAVTVVSSAALSASSAVTSRALRNR >Mature_425_residues SVIGLTLLFIALGEVSAHAINEDLDPSVGVDLLRQSKIRMFETSQWWDELWNDILGDNPRTTVNNKAMFSILLPFLLVAC LVLMARAGYSFLSGETHRIVLQQIVPIVLLLAFTLNYGWGAKAVAWSFREVANRGSELILDSQWAGLVVRDALKDKIHAA SAIAEYNRQSASCSRLPAITLRDPAAASSSQGLDQVQASKVQTAVRCLELLAQKLERDEAAIKKDCPSCETAQQVIESRK KGIQADLGRISAAIFNTLNPIDDAIHGFNVVKENAVRTVSIEGPLQIQYWFVSGQELALILSGILAPIMIIYSTLPIAGH KWAVLQYLKALVIIALVRFAYIFVIGFGAIYLTDNPIADQGAAFATFLGYVAPAVATAAVTVGALAASGVYTGAVVTTVG AAVTVVSSAALSASSAVTSRALRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45700; Mature: 45569
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIGLTLLFIALGEVSAHAINEDLDPSVGVDLLRQSKIRMFETSQWWDELWNDILGDNP CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RTTVNNKAMFSILLPFLLVACLVLMARAGYSFLSGETHRIVLQQIVPIVLLLAFTLNYGW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC GAKAVAWSFREVANRGSELILDSQWAGLVVRDALKDKIHAASAIAEYNRQSASCSRLPAI CCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEE TLRDPAAASSSQGLDQVQASKVQTAVRCLELLAQKLERDEAAIKKDCPSCETAQQVIESR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KKGIQADLGRISAAIFNTLNPIDDAIHGFNVVKENAVRTVSIEGPLQIQYWFVSGQELAL HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCHHHH ILSGILAPIMIIYSTLPIAGHKWAVLQYLKALVIIALVRFAYIFVIGFGAIYLTDNPIAD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC QGAAFATFLGYVAPAVATAAVTVGALAASGVYTGAVVTTVGAAVTVVSSAALSASSAVTS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALRNR HHHHCC >Mature Secondary Structure SVIGLTLLFIALGEVSAHAINEDLDPSVGVDLLRQSKIRMFETSQWWDELWNDILGDNP CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RTTVNNKAMFSILLPFLLVACLVLMARAGYSFLSGETHRIVLQQIVPIVLLLAFTLNYGW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC GAKAVAWSFREVANRGSELILDSQWAGLVVRDALKDKIHAASAIAEYNRQSASCSRLPAI CCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEE TLRDPAAASSSQGLDQVQASKVQTAVRCLELLAQKLERDEAAIKKDCPSCETAQQVIESR EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KKGIQADLGRISAAIFNTLNPIDDAIHGFNVVKENAVRTVSIEGPLQIQYWFVSGQELAL HCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCHHHH ILSGILAPIMIIYSTLPIAGHKWAVLQYLKALVIIALVRFAYIFVIGFGAIYLTDNPIAD HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC QGAAFATFLGYVAPAVATAAVTVGALAASGVYTGAVVTTVGAAVTVVSSAALSASSAVTS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALRNR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA