Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340475
Identifier: 158340475
GI number: 158340475
Start: 21749
End: 22207
Strand: Direct
Name: 158340475
Synonym: AM1_C0020
Alternate gene names: NA
Gene position: 21749-22207 (Clockwise)
Preceding gene: 158340474
Following gene: 158340476
Centisome position: 7.96
GC content: 43.79
Gene sequence:
>459_bases ATGACTGACTATCCCAGAAATTTCAAGTTAAACCGAACCGATATTGCGATCTCATATTTGCTACTCCGCCTCCTGATTGG CGTCAACTTTCTCAATCATGGACTAACACGGATTGGCAATATTCCAAGCTTTGTCGAAAGTATGGTGAAAGCCATGGAGA ATTCGTACTTTCCTGAACCCTTGGTTCGCATCAATGCTTTTTTAGTTCCTGTTGTAGAACTGATTGTGGGTCTGCTCATC ATTTTAGGTTGGCAAACCCGTATTGCGCTGACAATTACATCTGGTCTGATGGTGATTCTGATGCTCGGTGTTACCTCAGT TCAAAATTGGCAAGCCGCAGGGGACCAGTTGGTCTATGGTGTGATTTTGTTCATCCTGTTGGCCTGTCGTAGTTTCAATA CTGTTTCAGTGGACTATTGGCTAAAGCGTAAAACGACACCATCAGAACGATCTCGGTAA
Upstream 100 bases:
>100_bases CAATAGCGTCGTCAAGCTTAGCTTCAGTAGTGGATTAGGTTAACGACCGATTGCCATCTACTGCATGATGGCCCCAACTG TACTTCATTAACTGACAACG
Downstream 100 bases:
>100_bases TTGGGAAGATATAACGACCTTCTAAACATCCGTTCAGATCAAAAAAAGTGGAGAAAAGCACTGTGTGATGACAGCTGCTT GATAACACTGAAAACCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Subfamily
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLI ILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR
Sequences:
>Translated_152_residues MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLI ILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR >Mature_151_residues TDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLII LGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17189; Mature: 17058
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH LVRINAFLVPVVELIVGLLIILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILFILLACRSFNTVSVDYWLKRKTTPSERSR HHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCC >Mature Secondary Structure TDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH LVRINAFLVPVVELIVGLLIILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILFILLACRSFNTVSVDYWLKRKTTPSERSR HHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA