Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340475

Identifier: 158340475

GI number: 158340475

Start: 21749

End: 22207

Strand: Direct

Name: 158340475

Synonym: AM1_C0020

Alternate gene names: NA

Gene position: 21749-22207 (Clockwise)

Preceding gene: 158340474

Following gene: 158340476

Centisome position: 7.96

GC content: 43.79

Gene sequence:

>459_bases
ATGACTGACTATCCCAGAAATTTCAAGTTAAACCGAACCGATATTGCGATCTCATATTTGCTACTCCGCCTCCTGATTGG
CGTCAACTTTCTCAATCATGGACTAACACGGATTGGCAATATTCCAAGCTTTGTCGAAAGTATGGTGAAAGCCATGGAGA
ATTCGTACTTTCCTGAACCCTTGGTTCGCATCAATGCTTTTTTAGTTCCTGTTGTAGAACTGATTGTGGGTCTGCTCATC
ATTTTAGGTTGGCAAACCCGTATTGCGCTGACAATTACATCTGGTCTGATGGTGATTCTGATGCTCGGTGTTACCTCAGT
TCAAAATTGGCAAGCCGCAGGGGACCAGTTGGTCTATGGTGTGATTTTGTTCATCCTGTTGGCCTGTCGTAGTTTCAATA
CTGTTTCAGTGGACTATTGGCTAAAGCGTAAAACGACACCATCAGAACGATCTCGGTAA

Upstream 100 bases:

>100_bases
CAATAGCGTCGTCAAGCTTAGCTTCAGTAGTGGATTAGGTTAACGACCGATTGCCATCTACTGCATGATGGCCCCAACTG
TACTTCATTAACTGACAACG

Downstream 100 bases:

>100_bases
TTGGGAAGATATAACGACCTTCTAAACATCCGTTCAGATCAAAAAAAGTGGAGAAAAGCACTGTGTGATGACAGCTGCTT
GATAACACTGAAAACCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: DoxX Subfamily

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLI
ILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR

Sequences:

>Translated_152_residues
MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLI
ILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR
>Mature_151_residues
TDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEPLVRINAFLVPVVELIVGLLII
LGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYGVILFILLACRSFNTVSVDYWLKRKTTPSERSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17189; Mature: 17058

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
LVRINAFLVPVVELIVGLLIILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILFILLACRSFNTVSVDYWLKRKTTPSERSR
HHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDYPRNFKLNRTDIAISYLLLRLLIGVNFLNHGLTRIGNIPSFVESMVKAMENSYFPEP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
LVRINAFLVPVVELIVGLLIILGWQTRIALTITSGLMVILMLGVTSVQNWQAAGDQLVYG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILFILLACRSFNTVSVDYWLKRKTTPSERSR
HHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA