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The map label for this gene is ybjY [C]

Identifier: 158340473

GI number: 158340473

Start: 16820

End: 18298

Strand: Direct

Name: ybjY [C]

Synonym: AM1_C0018

Alternate gene names: 158340473

Gene position: 16820-18298 (Clockwise)

Preceding gene: 158340472

Following gene: 158340474

Centisome position: 6.16

GC content: 53.89

Gene sequence:

>1479_bases
TTGGCAATGATGGTGTTGCTATCGGCCTGTACCGTTCAAGCAGCGGATGACGCGAAGAAGTCCAAGGCTAGCCCTAAGAT
TGCTGCCGTTGATGTTGCAATCGCAAAACCGAATACGGATCATATCCTGGACTCCTTTACAGGGACGACGGCACCGATCC
AAGAAGTGATGGTGCGATCTCAAGTGGATGGACAACTGCAAAAACTAGCGGTAGAGGTCGGTGATCGGGTCGAGAAAGGA
CAGATCCTAGGACAACAAGATGATGGGGTTCTCACCGACACGGTCAACACCGCCCGCGCTGAAAGAGAAGCCCAGGTGGT
CGATGTCGCTAAAGCCCGTAGCCAAGTGGGAGCTGCTAAGGCCAACGTTGAACAAGCCCGTCTCGCCCTAGTCCAAGCGA
AAGGTAATGTTCTACAGTTGCAAAATGCTGCCCGCGCCAATATTGAAGCTGCCCGTCTCGAAGCCCAACAAAACCGCCAG
GATGCAAACCGATTAACGCAACTCGCTAATGCAGGTGCAACATCCCAGCAAGAGGCCGAACAGGCCCGCACCTTAGCCCA
GCGAACACAGCAAACCTTGGTGAATACCCAAGCCAACAGTGTCCAGGAAATCACCCAGGCCCAAACCGCCGTCAAAACTG
CTGAACAAGCCTTACAGGCTGCCATCGCCCAAGTTGACATTGAGCAAGGCACCGTTAATGCAACCCAAAGAAGAGTCTAT
GCTCAGCAATCTGTTCTCAACCAAGCCCTAGGGCAGCGATCCTTTACAGTGCTCTCAGCGCCCTTAACCGGCGTCGTTAT
GGAGCGCTTAAGCGAAGCAGGCAATCTCTTACAGACCGGCGATTCGATTCTGCGTCTCGGTGATTTCAAAAAGATTAAAA
TCACTATTCAAGTCCCCGCCAGGCTGTTGTCTCAACTTCGCATGGGACAACAGGCCAAGATCACCCTGGATGCCTTTCCC
CAACAAGAATGGTCTGGCAAAATCACTCTCATTTCGCCCCTCGCCAACACCACATCGCGGTTGTTACCTATCGAAATTTT
GATGGATAACCCCGGCAAAATGAGCAGTGGGCTACTGGCTCGAGTCAGCTTTGTCCAACCGCAACAAGGTCGGGTTTGGG
TGCCTGAGGCTGCCATACAGACCAGTCAATCTCGGAAAGGTCCATCCTCCACACCCAAACCGTCTAATCCAGATCACCCT
TCATCCCAGCAGCGCCCGTCACCGCAGCCACCTACAGATCGCAAACAGACACCCACCTCCAACCAAGCCACCCTGTTTGT
GCTCGACAAAGCTAGTCCACAGCCCCGCGTCACCTCTCGCCAAGTTCAGTTGGGGGCGCAACGCAATGGTCAAGTGGAAA
TCATTCAAGGGCTGACCTCAGGCGAATCCTTTGTCAGTCGTAGCAGTCAGCCCCTAAAGGACGGAGCCACCGTCCGCTTG
AGCGCCCTCTCAGAATCGTCATCTTCGGTGAACCCCTAA

Upstream 100 bases:

>100_bases
TCTTTGGAGTCTTTCACTTAAAGCTGAAGCACATCAAAGGATTGCCAGTGCAAGGTGAATGTGAAGTATGTATTTGAATC
TGAGATCGCAAGGGTTAGGG

Downstream 100 bases:

>100_bases
TGGAAAGGTCTACCTTAAGCCTCAGCACCCTCTCCATTCGACGACATATTGGCGTATTCATGTTGACCCTGACCATCGTA
GTGTTGGGCCTGTTTTTTCT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Membrane-Fusion Protein; RND Efflux Membrane Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; HlyD Family Secretion Protein; Periplasmic Component Of Efflux System; RND Efflux Membrane Fusion Protein-Related Protein; HlyD-Like Secretion Protein; MFP Family Efflux Transporter; RND Family Efflux Transporter Subunit MFP; Membrane Efflux Protein; Multidrug Resistance Efflux Pump Protein; Secretion Protein; RND Efflux Transporter; RND Efflux Membrane-Fusionprotein; RND Efflux Membrane-Fusion Protein; Cation Efflux System Protein

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MAMMVLLSACTVQAADDAKKSKASPKIAAVDVAIAKPNTDHILDSFTGTTAPIQEVMVRSQVDGQLQKLAVEVGDRVEKG
QILGQQDDGVLTDTVNTARAEREAQVVDVAKARSQVGAAKANVEQARLALVQAKGNVLQLQNAARANIEAARLEAQQNRQ
DANRLTQLANAGATSQQEAEQARTLAQRTQQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVDIEQGTVNATQRRVY
AQQSVLNQALGQRSFTVLSAPLTGVVMERLSEAGNLLQTGDSILRLGDFKKIKITIQVPARLLSQLRMGQQAKITLDAFP
QQEWSGKITLISPLANTTSRLLPIEILMDNPGKMSSGLLARVSFVQPQQGRVWVPEAAIQTSQSRKGPSSTPKPSNPDHP
SSQQRPSPQPPTDRKQTPTSNQATLFVLDKASPQPRVTSRQVQLGAQRNGQVEIIQGLTSGESFVSRSSQPLKDGATVRL
SALSESSSSVNP

Sequences:

>Translated_492_residues
MAMMVLLSACTVQAADDAKKSKASPKIAAVDVAIAKPNTDHILDSFTGTTAPIQEVMVRSQVDGQLQKLAVEVGDRVEKG
QILGQQDDGVLTDTVNTARAEREAQVVDVAKARSQVGAAKANVEQARLALVQAKGNVLQLQNAARANIEAARLEAQQNRQ
DANRLTQLANAGATSQQEAEQARTLAQRTQQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVDIEQGTVNATQRRVY
AQQSVLNQALGQRSFTVLSAPLTGVVMERLSEAGNLLQTGDSILRLGDFKKIKITIQVPARLLSQLRMGQQAKITLDAFP
QQEWSGKITLISPLANTTSRLLPIEILMDNPGKMSSGLLARVSFVQPQQGRVWVPEAAIQTSQSRKGPSSTPKPSNPDHP
SSQQRPSPQPPTDRKQTPTSNQATLFVLDKASPQPRVTSRQVQLGAQRNGQVEIIQGLTSGESFVSRSSQPLKDGATVRL
SALSESSSSVNP
>Mature_491_residues
AMMVLLSACTVQAADDAKKSKASPKIAAVDVAIAKPNTDHILDSFTGTTAPIQEVMVRSQVDGQLQKLAVEVGDRVEKGQ
ILGQQDDGVLTDTVNTARAEREAQVVDVAKARSQVGAAKANVEQARLALVQAKGNVLQLQNAARANIEAARLEAQQNRQD
ANRLTQLANAGATSQQEAEQARTLAQRTQQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVDIEQGTVNATQRRVYA
QQSVLNQALGQRSFTVLSAPLTGVVMERLSEAGNLLQTGDSILRLGDFKKIKITIQVPARLLSQLRMGQQAKITLDAFPQ
QEWSGKITLISPLANTTSRLLPIEILMDNPGKMSSGLLARVSFVQPQQGRVWVPEAAIQTSQSRKGPSSTPKPSNPDHPS
SQQRPSPQPPTDRKQTPTSNQATLFVLDKASPQPRVTSRQVQLGAQRNGQVEIIQGLTSGESFVSRSSQPLKDGATVRLS
ALSESSSSVNP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52707; Mature: 52576

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMMVLLSACTVQAADDAKKSKASPKIAAVDVAIAKPNTDHILDSFTGTTAPIQEVMVRS
CHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHH
QVDGQLQKLAVEVGDRVEKGQILGQQDDGVLTDTVNTARAEREAQVVDVAKARSQVGAAK
HHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ANVEQARLALVQAKGNVLQLQNAARANIEAARLEAQQNRQDANRLTQLANAGATSQQEAE
HHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QARTLAQRTQQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVDIEQGTVNATQRRVY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AQQSVLNQALGQRSFTVLSAPLTGVVMERLSEAGNLLQTGDSILRLGDFKKIKITIQVPA
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCHHHCCCCCEEEEEEEECHH
RLLSQLRMGQQAKITLDAFPQQEWSGKITLISPLANTTSRLLPIEILMDNPGKMSSGLLA
HHHHHHHCCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHH
RVSFVQPQQGRVWVPEAAIQTSQSRKGPSSTPKPSNPDHPSSQQRPSPQPPTDRKQTPTS
EEEECCCCCCCEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQATLFVLDKASPQPRVTSRQVQLGAQRNGQVEIIQGLTSGESFVSRSSQPLKDGATVRL
CCEEEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEEE
SALSESSSSVNP
EEECCCCCCCCC
>Mature Secondary Structure 
AMMVLLSACTVQAADDAKKSKASPKIAAVDVAIAKPNTDHILDSFTGTTAPIQEVMVRS
HHHHHHHHHHHHCHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHH
QVDGQLQKLAVEVGDRVEKGQILGQQDDGVLTDTVNTARAEREAQVVDVAKARSQVGAAK
HHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
ANVEQARLALVQAKGNVLQLQNAARANIEAARLEAQQNRQDANRLTQLANAGATSQQEAE
HHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
QARTLAQRTQQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVDIEQGTVNATQRRVY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AQQSVLNQALGQRSFTVLSAPLTGVVMERLSEAGNLLQTGDSILRLGDFKKIKITIQVPA
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCHHHCCCCCEEEEEEEECHH
RLLSQLRMGQQAKITLDAFPQQEWSGKITLISPLANTTSRLLPIEILMDNPGKMSSGLLA
HHHHHHHCCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCHHH
RVSFVQPQQGRVWVPEAAIQTSQSRKGPSSTPKPSNPDHPSSQQRPSPQPPTDRKQTPTS
EEEECCCCCCCEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQATLFVLDKASPQPRVTSRQVQLGAQRNGQVEIIQGLTSGESFVSRSSQPLKDGATVRL
CCEEEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEEE
SALSESSSSVNP
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA