Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340470
Identifier: 158340470
GI number: 158340470
Start: 13046
End: 14269
Strand: Reverse
Name: 158340470
Synonym: AM1_C0015
Alternate gene names: NA
Gene position: 14269-13046 (Counterclockwise)
Preceding gene: 158340479
Following gene: 158340469
Centisome position: 5.22
GC content: 47.79
Gene sequence:
>1224_bases ATGGGCCTTGCCGTTATCCATTGGATAACTCTGAAACCCTTAGGGTGGCCCCTTAATGTCCAATTACCTTTATTGTCCAG ATTACCCATGAAAGTATCGCTATTTCTGGGGTTTAATCACCATAGACTTCCCATGAAGTGTAAGACCATAACATCTTGGC TGGGTGTAATGGTGGTTGGCTTGATCATCCAAGCTTGTAATCAGCACAGTGGGGGAGGGACTGTAAGTGTCGATCCCACT CTATTTTATGAAGATGCCTTAGTAGGTGATATTGCAGAGGAATTGTGTACGCTGTCAGGAGGAACAGAAACAATCTGTTA CCGCATCACCGTTAAATCCACTCCGGTGGATCATCAAGCAGTGCCATGGTGCCCAGAAACTATTAGTGATGGAGATAAAG CTGGCGGAATCTGGCCAGACGGCGGCAAAATTAATAATGTTGATGGCGCTTTTATCAAAAATCTGGAGGCTTTTTACAGC GACGATCAATGGAAACTCTATCGAGACGATGGCTCCGTTCGAGTCACGGATTCAAAAGAGGCCTGCGTTGCTGCTCGTCC AAATGTTGATGAAGACTACCAAAATTTCTGTGTGCAGTGCTTACTGTCCTATTTAGAGAAAGGCATGGTTAACACTCACA TCATCCCGATCAAGCCTGTTCAGCAAACAAAACCGAGGCAAATCGCTCGCACATCTGGGGGTTTAGCGCTCAATGGGGTA AATTTTGATCCCCCCGCACCGACAAATGCAATTTTGAGTGCCCGTACACTCACCCCATTTGACGACTGCGGTGGTCATAT CCATCTTAATCATGGCTATCACTACCATGCCCATACGGGCTGCCTAACTGAGGTAGCACAGGAAGATACGCATAGTCTCA TGATTGGCCATGCTCTCGAAGGGTTCTCACTTCACGCTCGATTGGAGGAGCAAAGCGCAGAGGAGAGCAGCTTAGATGAG TGCCGGGGTCATTCTAATGAAACTCGTGGCTATCACTATCATGTCACCGACCCTGGTAGTAACTCCTTTATCAACTGTTT TCAGAGGAGTATGGGTGCTCGTTTGAAGGAGATGGGGAAGGGCAGGCCTGTGATGCCGCATCAACAGACAATAGAAGGGG ACCGGGTGGCCCCTCTCGTGAGGGTGAGGGAAAATCCAGAAGACCGGATGATGAAGCAGTCAAAGAATCTCATTGTGCAC AACCTCATTTATAACCTTGCCTGA
Upstream 100 bases:
>100_bases ACCCATGACCAATGGCCTATAAATTTTGGCCATATGGGACATGACAGAGGCTGCAGCTTCAACCATGCTCAATACATGTA GTCATCCAGAAGATTGTTAA
Downstream 100 bases:
>100_bases ATACCAGTCAACAGCACGCTAAGCACAACCATAAATACATTGGAGAGAATCGTGAGCATGCAGATGGAAGCCTCATACAT GCTGATAGTTAGGCTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MGLAVIHWITLKPLGWPLNVQLPLLSRLPMKVSLFLGFNHHRLPMKCKTITSWLGVMVVGLIIQACNQHSGGGTVSVDPT LFYEDALVGDIAEELCTLSGGTETICYRITVKSTPVDHQAVPWCPETISDGDKAGGIWPDGGKINNVDGAFIKNLEAFYS DDQWKLYRDDGSVRVTDSKEACVAARPNVDEDYQNFCVQCLLSYLEKGMVNTHIIPIKPVQQTKPRQIARTSGGLALNGV NFDPPAPTNAILSARTLTPFDDCGGHIHLNHGYHYHAHTGCLTEVAQEDTHSLMIGHALEGFSLHARLEEQSAEESSLDE CRGHSNETRGYHYHVTDPGSNSFINCFQRSMGARLKEMGKGRPVMPHQQTIEGDRVAPLVRVRENPEDRMMKQSKNLIVH NLIYNLA
Sequences:
>Translated_407_residues MGLAVIHWITLKPLGWPLNVQLPLLSRLPMKVSLFLGFNHHRLPMKCKTITSWLGVMVVGLIIQACNQHSGGGTVSVDPT LFYEDALVGDIAEELCTLSGGTETICYRITVKSTPVDHQAVPWCPETISDGDKAGGIWPDGGKINNVDGAFIKNLEAFYS DDQWKLYRDDGSVRVTDSKEACVAARPNVDEDYQNFCVQCLLSYLEKGMVNTHIIPIKPVQQTKPRQIARTSGGLALNGV NFDPPAPTNAILSARTLTPFDDCGGHIHLNHGYHYHAHTGCLTEVAQEDTHSLMIGHALEGFSLHARLEEQSAEESSLDE CRGHSNETRGYHYHVTDPGSNSFINCFQRSMGARLKEMGKGRPVMPHQQTIEGDRVAPLVRVRENPEDRMMKQSKNLIVH NLIYNLA >Mature_406_residues GLAVIHWITLKPLGWPLNVQLPLLSRLPMKVSLFLGFNHHRLPMKCKTITSWLGVMVVGLIIQACNQHSGGGTVSVDPTL FYEDALVGDIAEELCTLSGGTETICYRITVKSTPVDHQAVPWCPETISDGDKAGGIWPDGGKINNVDGAFIKNLEAFYSD DQWKLYRDDGSVRVTDSKEACVAARPNVDEDYQNFCVQCLLSYLEKGMVNTHIIPIKPVQQTKPRQIARTSGGLALNGVN FDPPAPTNAILSARTLTPFDDCGGHIHLNHGYHYHAHTGCLTEVAQEDTHSLMIGHALEGFSLHARLEEQSAEESSLDEC RGHSNETRGYHYHVTDPGSNSFINCFQRSMGARLKEMGKGRPVMPHQQTIEGDRVAPLVRVRENPEDRMMKQSKNLIVHN LIYNLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45071; Mature: 44940
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAVIHWITLKPLGWPLNVQLPLLSRLPMKVSLFLGFNHHRLPMKCKTITSWLGVMVVG CCEEEEEEEEECCCCCCEEEECHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH LIIQACNQHSGGGTVSVDPTLFYEDALVGDIAEELCTLSGGTETICYRITVKSTPVDHQA HHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC VPWCPETISDGDKAGGIWPDGGKINNVDGAFIKNLEAFYSDDQWKLYRDDGSVRVTDSKE CCCCCHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCC ACVAARPNVDEDYQNFCVQCLLSYLEKGMVNTHIIPIKPVQQTKPRQIARTSGGLALNGV CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEEECC NFDPPAPTNAILSARTLTPFDDCGGHIHLNHGYHYHAHTGCLTEVAQEDTHSLMIGHALE CCCCCCCCHHHEECCCCCCHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHEEEEHHCC GFSLHARLEEQSAEESSLDECRGHSNETRGYHYHVTDPGSNSFINCFQRSMGARLKEMGK CCEEEEEHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC GRPVMPHQQTIEGDRVAPLVRVRENPEDRMMKQSKNLIVHNLIYNLA CCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure GLAVIHWITLKPLGWPLNVQLPLLSRLPMKVSLFLGFNHHRLPMKCKTITSWLGVMVVG CEEEEEEEEECCCCCCEEEECHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH LIIQACNQHSGGGTVSVDPTLFYEDALVGDIAEELCTLSGGTETICYRITVKSTPVDHQA HHHHHHCCCCCCCEEEECCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCC VPWCPETISDGDKAGGIWPDGGKINNVDGAFIKNLEAFYSDDQWKLYRDDGSVRVTDSKE CCCCCHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCC ACVAARPNVDEDYQNFCVQCLLSYLEKGMVNTHIIPIKPVQQTKPRQIARTSGGLALNGV CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCEEEECC NFDPPAPTNAILSARTLTPFDDCGGHIHLNHGYHYHAHTGCLTEVAQEDTHSLMIGHALE CCCCCCCCHHHEECCCCCCHHHCCCEEEECCCEEEECCCHHHHHHHHHHHHHEEEEHHCC GFSLHARLEEQSAEESSLDECRGHSNETRGYHYHVTDPGSNSFINCFQRSMGARLKEMGK CCEEEEEHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC GRPVMPHQQTIEGDRVAPLVRVRENPEDRMMKQSKNLIVHNLIYNLA CCCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA