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The map label for this gene is 158340467

Identifier: 158340467

GI number: 158340467

Start: 5909

End: 6154

Strand: Direct

Name: 158340467

Synonym: AM1_C0012

Alternate gene names: NA

Gene position: 5909-6154 (Clockwise)

Preceding gene: 158340457

Following gene: 158340468

Centisome position: 2.16

GC content: 43.9

Gene sequence:

>246_bases
ATGCTGACTCTGTTGGAGTTGGTCGAGAATTTGGAACTCAGTTTCAGTCAATGGTTTTTGCTAATGCGTCGGAAGCAGGG
GTTAACTCAGGACGATATAGCTGAAGCACTTGGCATTAGCGGTCAGTCAGTTAGTAATTGGGAGAGAGGCCGTTCTATTC
CAACACTGACGATTGATCAGGTAAAAACCTTATGCAAAATCCTCGACTGTACCCTTAATGACATCCCTAGTTCTGATACT
GAATGA

Upstream 100 bases:

>100_bases
TAATATCAAACTCATTTATATAAATCAAATTTATTTTTAGTTTGCCCTTTTATTTGGAAAAAGCTAAGCTATTCGGTAGT
TCCGTAAATAGGGAGGCTAT

Downstream 100 bases:

>100_bases
CAAGACTTCGTAGTTAATTACACTAGCTGGCAGACATTCAATGACGTGATGAATAAAGGGTGTAAATATGGATAATCGCA
CTACATATCGAACACACGTA

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLTLLELVENLELSFSQWFLLMRRKQGLTQDDIAEALGISGQSVSNWERGRSIPTLTIDQVKTLCKILDCTLNDIPSSDT
E

Sequences:

>Translated_81_residues
MLTLLELVENLELSFSQWFLLMRRKQGLTQDDIAEALGISGQSVSNWERGRSIPTLTIDQVKTLCKILDCTLNDIPSSDT
E
>Mature_81_residues
MLTLLELVENLELSFSQWFLLMRRKQGLTQDDIAEALGISGQSVSNWERGRSIPTLTIDQVKTLCKILDCTLNDIPSSDT
E

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9141; Mature: 9141

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLLELVENLELSFSQWFLLMRRKQGLTQDDIAEALGISGQSVSNWERGRSIPTLTIDQ
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCEEHHH
VKTLCKILDCTLNDIPSSDTE
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTLLELVENLELSFSQWFLLMRRKQGLTQDDIAEALGISGQSVSNWERGRSIPTLTIDQ
CCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCCEEHHH
VKTLCKILDCTLNDIPSSDTE
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA