Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340464
Identifier: 158340464
GI number: 158340464
Start: 4020
End: 4808
Strand: Reverse
Name: 158340464
Synonym: AM1_C0009
Alternate gene names: NA
Gene position: 4808-4020 (Counterclockwise)
Preceding gene: 158340465
Following gene: 158340463
Centisome position: 1.76
GC content: 38.53
Gene sequence:
>789_bases TTGCAAAATCAACTTGAAGGTAGTAAATGGATGGCTAATTTTCAAGAAATCCATGCACATATGGAGTTTGAAGAATGGGC TTATCAGCAGGGACTACAAGATAGTGAGAAATATCTTATTGAAACTTATTTAGATAAATCAGGGAAAACGGTTGAGGCTG GTACAGGTGGTGGCCGGATTTTGCTGGCGATGCAAAATCTTGGCTTTAAGCATCTCTATGGATTTGATTACTTGACTGAT TTTATTGATGCTGCAACAAAAAATGATCAAACTCAGCAAATTATCTTTACTGCTCAGAATGCTAGCCAGTTAAATTATCA AGATTGTTTTTTTGATAACGCTATTTATTTACAGCAAGTCGTTTGCTATCCCGATAGTGACACTGAACGCCTCAAAGTAC TTCAGGAGGCTTACCGGATTCTCAAAGTAGGTGGAATCGCAATATTTTCTGTCCTACTATTCGATGCACGATTGAAAAGT TTAGCCTACTCCCTATTTATTCAGTACATCCGTCTATTAAGAGTGTTGCGTTTCTCTCAACGCTCAATTCAGTATTTACC CTCGTTACAAATCCAACGCCAGAACAACTATTCAGCCTTACTAGATGCCCCTCCCTATATGTATTGGTACAAGATGGAAG AGTTTTACCGAGCTTTGACAGAACTGAATTTTGAAGTAATTGCAATGGGAACCAATCATCAAGTAGACTGCCGAAAAACT AGTGATACTCCGACAGAGTTAGCTCAATTATCTTTGGGGAATCAGCTTTATTGCGTGTGTAGGAAGTAA
Upstream 100 bases:
>100_bases AGGATTTGACGATTACAACCAGGGTTCTAACCCTCATGCACTCCAGCGAGTATTAGTCTTCTAGACATGCTGTCTTTGAT GGCTTATAAAGTCTTCAGTC
Downstream 100 bases:
>100_bases TTCAAGTTTCTTAAGTTAAGCATTTATGTATTTCCTTCTGAATCGCTGGCGGAAGATCTCAAAGTGTTGAAGCCGAATGT CTGCTTCCCCCTTCCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT SDTPTELAQLSLGNQLYCVCRK
Sequences:
>Translated_262_residues MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT SDTPTELAQLSLGNQLYCVCRK >Mature_262_residues MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT SDTPTELAQLSLGNQLYCVCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30511; Mature: 30511
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRI CCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCEE LLAMQNLGFKHLYGFDYLTDFIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQV EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHE VCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKSLAYSLFIQYIRLLRVLRFSQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT HHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECEEC SDTPTELAQLSLGNQLYCVCRK CCCHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRI CCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCEE LLAMQNLGFKHLYGFDYLTDFIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQV EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHE VCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKSLAYSLFIQYIRLLRVLRFSQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT HHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECEEC SDTPTELAQLSLGNQLYCVCRK CCCHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA