Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

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The map label for this gene is 158340464

Identifier: 158340464

GI number: 158340464

Start: 4020

End: 4808

Strand: Reverse

Name: 158340464

Synonym: AM1_C0009

Alternate gene names: NA

Gene position: 4808-4020 (Counterclockwise)

Preceding gene: 158340465

Following gene: 158340463

Centisome position: 1.76

GC content: 38.53

Gene sequence:

>789_bases
TTGCAAAATCAACTTGAAGGTAGTAAATGGATGGCTAATTTTCAAGAAATCCATGCACATATGGAGTTTGAAGAATGGGC
TTATCAGCAGGGACTACAAGATAGTGAGAAATATCTTATTGAAACTTATTTAGATAAATCAGGGAAAACGGTTGAGGCTG
GTACAGGTGGTGGCCGGATTTTGCTGGCGATGCAAAATCTTGGCTTTAAGCATCTCTATGGATTTGATTACTTGACTGAT
TTTATTGATGCTGCAACAAAAAATGATCAAACTCAGCAAATTATCTTTACTGCTCAGAATGCTAGCCAGTTAAATTATCA
AGATTGTTTTTTTGATAACGCTATTTATTTACAGCAAGTCGTTTGCTATCCCGATAGTGACACTGAACGCCTCAAAGTAC
TTCAGGAGGCTTACCGGATTCTCAAAGTAGGTGGAATCGCAATATTTTCTGTCCTACTATTCGATGCACGATTGAAAAGT
TTAGCCTACTCCCTATTTATTCAGTACATCCGTCTATTAAGAGTGTTGCGTTTCTCTCAACGCTCAATTCAGTATTTACC
CTCGTTACAAATCCAACGCCAGAACAACTATTCAGCCTTACTAGATGCCCCTCCCTATATGTATTGGTACAAGATGGAAG
AGTTTTACCGAGCTTTGACAGAACTGAATTTTGAAGTAATTGCAATGGGAACCAATCATCAAGTAGACTGCCGAAAAACT
AGTGATACTCCGACAGAGTTAGCTCAATTATCTTTGGGGAATCAGCTTTATTGCGTGTGTAGGAAGTAA

Upstream 100 bases:

>100_bases
AGGATTTGACGATTACAACCAGGGTTCTAACCCTCATGCACTCCAGCGAGTATTAGTCTTCTAGACATGCTGTCTTTGAT
GGCTTATAAAGTCTTCAGTC

Downstream 100 bases:

>100_bases
TTCAAGTTTCTTAAGTTAAGCATTTATGTATTTCCTTCTGAATCGCTGGCGGAAGATCTCAAAGTGTTGAAGCCGAATGT
CTGCTTCCCCCTTCCCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD
FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS
LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT
SDTPTELAQLSLGNQLYCVCRK

Sequences:

>Translated_262_residues
MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD
FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS
LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT
SDTPTELAQLSLGNQLYCVCRK
>Mature_262_residues
MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRILLAMQNLGFKHLYGFDYLTD
FIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQVVCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKS
LAYSLFIQYIRLLRVLRFSQRSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT
SDTPTELAQLSLGNQLYCVCRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30511; Mature: 30511

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRI
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCEE
LLAMQNLGFKHLYGFDYLTDFIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQV
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHE
VCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKSLAYSLFIQYIRLLRVLRFSQ
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT
HHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECEEC
SDTPTELAQLSLGNQLYCVCRK
CCCHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MQNQLEGSKWMANFQEIHAHMEFEEWAYQQGLQDSEKYLIETYLDKSGKTVEAGTGGGRI
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCEE
LLAMQNLGFKHLYGFDYLTDFIDAATKNDQTQQIIFTAQNASQLNYQDCFFDNAIYLQQV
EEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCHHHHHHE
VCYPDSDTERLKVLQEAYRILKVGGIAIFSVLLFDARLKSLAYSLFIQYIRLLRVLRFSQ
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSIQYLPSLQIQRQNNYSALLDAPPYMYWYKMEEFYRALTELNFEVIAMGTNHQVDCRKT
HHHHHCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECEEC
SDTPTELAQLSLGNQLYCVCRK
CCCHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA