Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340461
Identifier: 158340461
GI number: 158340461
Start: 2686
End: 3132
Strand: Reverse
Name: 158340461
Synonym: AM1_C0006
Alternate gene names: NA
Gene position: 3132-2686 (Counterclockwise)
Preceding gene: 158340462
Following gene: 158340460
Centisome position: 1.15
GC content: 52.13
Gene sequence:
>447_bases ATGACCCAAGTATTAACCGCCCAAGTCCTTTTCCCGGCCAAAGAATGGGATACCCAGTATGGCCCACGCCTTAACGCCAA AATCAAGGTAGCGAATGGTGAAGAGGCTAAGTTATGGGGACCACCTGGCGATGCAGCTTTGCTCGCTCTCCGTAGAGGCC AAACCATCCAGATTGCCAAAGATGGCAAAGGCAAGTACAGCCTGGTCGAGCAAGCCCCGGTTCCAGGTCAATCCCCAGTG GATGAGGGTGCGCCCCTGGATGATGGGGAGCTGAATGGAGAGGTCAAGAATGCGATTGCCAGTTACATCACTCATCGAGC AGCCCTGTATTCCTTCTGTTATCAAGAAGCATCTAGAGAGCTAGAGAAGCACGAAGCAAGTGAAGAGACCGTCAAGTGTG CGGCCAGCACTTTGTTCATTGCTGCTCAGAAGAAGTTTGGGATTTGA
Upstream 100 bases:
>100_bases CATGTGTCGGGGGTTTCGCGTATCTACTGGAGAAGAATCGTATGCCCGTTTCCACTCCCCCAACTTTGCTCATGGTGGAC GCATTGCAAGGAGGACACCG
Downstream 100 bases:
>100_bases GATGAATGTCTGGTAGGAAGTTGAGGATGGGGAAAGGGCGACCAGGAGTGTAGTGTGCCGCCCCTAGTGAGATTGCCAAT CACAATCGCCTCAGAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTQVLTAQVLFPAKEWDTQYGPRLNAKIKVANGEEAKLWGPPGDAALLALRRGQTIQIAKDGKGKYSLVEQAPVPGQSPV DEGAPLDDGELNGEVKNAIASYITHRAALYSFCYQEASRELEKHEASEETVKCAASTLFIAAQKKFGI
Sequences:
>Translated_148_residues MTQVLTAQVLFPAKEWDTQYGPRLNAKIKVANGEEAKLWGPPGDAALLALRRGQTIQIAKDGKGKYSLVEQAPVPGQSPV DEGAPLDDGELNGEVKNAIASYITHRAALYSFCYQEASRELEKHEASEETVKCAASTLFIAAQKKFGI >Mature_147_residues TQVLTAQVLFPAKEWDTQYGPRLNAKIKVANGEEAKLWGPPGDAALLALRRGQTIQIAKDGKGKYSLVEQAPVPGQSPVD EGAPLDDGELNGEVKNAIASYITHRAALYSFCYQEASRELEKHEASEETVKCAASTLFIAAQKKFGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16032; Mature: 15901
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVLTAQVLFPAKEWDTQYGPRLNAKIKVANGEEAKLWGPPGDAALLALRRGQTIQIAK CCCEEEEEEEECCHHCCCCCCCCCCCEEEECCCCCCEEECCCCCHHEEEECCCCEEEEEE DGKGKYSLVEQAPVPGQSPVDEGAPLDDGELNGEVKNAIASYITHRAALYSFCYQEASRE CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKHEASEETVKCAASTLFIAAQKKFGI HHHHCCHHHHHHHHHHHHHEEEHHHCCC >Mature Secondary Structure TQVLTAQVLFPAKEWDTQYGPRLNAKIKVANGEEAKLWGPPGDAALLALRRGQTIQIAK CCEEEEEEEECCHHCCCCCCCCCCCEEEECCCCCCEEECCCCCHHEEEECCCCEEEEEE DGKGKYSLVEQAPVPGQSPVDEGAPLDDGELNGEVKNAIASYITHRAALYSFCYQEASRE CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKHEASEETVKCAASTLFIAAQKKFGI HHHHCCHHHHHHHHHHHHHEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA