Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340453
Identifier: 158340453
GI number: 158340453
Start: 270505
End: 270861
Strand: Reverse
Name: 158340453
Synonym: AM1_C0381
Alternate gene names: NA
Gene position: 270861-270505 (Counterclockwise)
Preceding gene: 158340454
Following gene: 158340452
Centisome position: 99.17
GC content: 56.02
Gene sequence:
>357_bases ATGAGTAGCGAAGAACAGCAATTTAGAGAAGCGTTGCAAATCGGCCAGCAGGCCGTGAATGCGACCAACAGCGTCATCAT CAATGCCGTCGCCCTCCGCAAGCCGCGAGTGGCGGTCAAGATCGAGACCGCTGAACAGGCAATGGAACTGGCGAAGCAGG AGATACGGAACAACACCCCCACGGATGTGATTAAGACCAAGCTACGGATGAGCGACTATGCCGAGAAAGTGCAAGACCCA ACCAAGATGGCGGAGCGGTATGTGAAGAGTGCCCAGCTCAAAGTCGCGGTGGAAACCCACGGCCACAAGCTCACCCAGAA TCGGAACCGAGGCCAAAATCGAGGGTTTGGACGGTAG
Upstream 100 bases:
>100_bases AACAAATCATGTCCGACCGCATGGTGTCTGCGGATGCTTTGCTGCCCTCTACCCAAGAAGTTGAATCCCACAAATTGAAG CAACAGGAGGAACAAGCCGC
Downstream 100 bases:
>100_bases CGGTACATTCTCTTGCAACGATTTAGGACTCTAACTATGGAGAACTTGAACAGTGGAAAAACTTGAATTTCAGAATTTCA TCAGCAAAAAATATCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSSEEQQFREALQIGQQAVNATNSVIINAVALRKPRVAVKIETAEQAMELAKQEIRNNTPTDVIKTKLRMSDYAEKVQDP TKMAERYVKSAQLKVAVETHGHKLTQNRNRGQNRGFGR
Sequences:
>Translated_118_residues MSSEEQQFREALQIGQQAVNATNSVIINAVALRKPRVAVKIETAEQAMELAKQEIRNNTPTDVIKTKLRMSDYAEKVQDP TKMAERYVKSAQLKVAVETHGHKLTQNRNRGQNRGFGR >Mature_117_residues SSEEQQFREALQIGQQAVNATNSVIINAVALRKPRVAVKIETAEQAMELAKQEIRNNTPTDVIKTKLRMSDYAEKVQDPT KMAERYVKSAQLKVAVETHGHKLTQNRNRGQNRGFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13334; Mature: 13203
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEEQQFREALQIGQQAVNATNSVIINAVALRKPRVAVKIETAEQAMELAKQEIRNNTP CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCC TDVIKTKLRMSDYAEKVQDPTKMAERYVKSAQLKVAVETHGHKLTQNRNRGQNRGFGR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SSEEQQFREALQIGQQAVNATNSVIINAVALRKPRVAVKIETAEQAMELAKQEIRNNTP CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCC TDVIKTKLRMSDYAEKVQDPTKMAERYVKSAQLKVAVETHGHKLTQNRNRGQNRGFGR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA