| Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
|---|---|
| Accession | NC_009928 |
| Length | 273,121 |
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The map label for this gene is traI [H]
Identifier: 158340451
GI number: 158340451
Start: 262357
End: 267936
Strand: Direct
Name: traI [H]
Synonym: AM1_C0379
Alternate gene names: 158340451
Gene position: 262357-267936 (Clockwise)
Preceding gene: 158340448
Following gene: 158340455
Centisome position: 96.06
GC content: 51.58
Gene sequence:
>5580_bases ATGATTGACTATTACGATGAGGATGAATCTCTCGTAGATGCTCCAGAGCGCTATTACAGCGAATCCGAGGTTATCACTGA CATCGACCGCATGAGTACCGCTGTCTGGGTCGGCTCCAACGCGATTGTTCAAAAGTTAGGCACCTACGTTAAACGAGAGG ACTTTAAAGCCCTCAGTCGAGGATTTCTGCCTGAATCCTTAAAGAGTGTCGCGGGTGGTGCAGTCCAACGGATTCGGGGC AAGAAACCCAACGAAGAAGACAAAGAACGCCTTGCCCATGACCTGGTGCTGTCTGCGCCTAAAAGTGTGTCGATGGCCCT GCACTTAGAGGGGGACAACCGGATCTTTGATGCCCACATGGAGGCAGTTCTCGAAACCTTTGAGTTGCTTGAACGCGAGT ATGCCCAGACCCGAATTCAAGTAAACGGGGTGCGCTCCGTCGTCGATACGGGCAATATGATTGCTGCATTGATGCCTCAT CACACGTCTCGCGATGGAGACATGCAGCTCCACACCCACATGCTGATCATGAATGGCACTGAGGGGCCAGATGGTCGGTG GCGCTCCCTCTCTCATGAAAAGCTGGCTCAGGCCAAGTGGATCGGCAGCTTCTACCGTCAGAAGTTAGCTGAGAAAGTTC AACGGCTGGGCTATCGCATCTATCAAACCAAGGATGCATTTGAGCTAGTGGGCTACGACCGTTCTGATGTCGAAGTCTTT TCTAAGCGTCACCGGGCCATCGTCAAAGCGGTTCAGAAAGAGGGGCTAGAAGTTACTCCTGAGAATAAGAAGCTGAAGGT ACTCCCCACTCGCAAAGCTAAGCGGGGTGTGGGCAAAAAGCTCGAAATCATCCAAGACCATTGGAGAGAAGAAGCCCGCT CTCAAGGGGTGGGTCATCCGGTTTTGGCTGAACCTCTGGCTGTAATGCCTGACCCAGACCGAGCCAGGTATGAGGTTGAA AGTGCTATTCGCCATTATGCGGAGTGGTCCTCAATCTTTGAGAAGGACGACATCTATGCCTATGTCTTCAAGACCCTCAA ACGTCAAGGCATGGCTATGGAACAGGTGGATGAGGCCATCAAGCAAAGCAAGGAACTGATCCCCGTTGACCGTGGATTCA CCACCGTCACTGCCGTTGAAGAAGAAGCCCAGATCCACCAGCGCTGGATGGAGGGCCAAGGTCAAGCTCAGCCGATGGTC GCTCATCCTTCCCTTTTGGGGATTAGCGTTGAGCTGAATGAAGACCAGGCCAAGGCCATACTCAATACCCTCTCCAGCTC TGACCGTTACCAAATCTGGCAGGGCTTTCCAGGGGTGGGCAAATCTCGCACATTGGGGGTACTCAAGACTTTACTCAATG GATCTGGCTTAAGTATTCGGGGATTCAGCCCCACGATTCCAGCCGCAAAGAAGCTCCAGGATGAGCTTGGAATCACGACC AATACCGTTGAGCATCTAGTTCTACATAAAGTTGAGGACAGCCCCAATCAAGTCTGGCTGATTGATGAAGCGGGCATGAT GAGCCGACGACAGATGAAGGTGATTCTGGAGAAAGCTGAACCCATTGGGGCACAAGTCATCTTCGTAGGGGATGCAGGTC AAAACTCTGCGATTGAGGCAGGCAATCCCTTCAAGTTCATGCAGGCCAATGGAGCCACCACCCATCGGATTGAGGAGATT GTCAGGCAAAAAGTTGATGTCCAAAAGCAGGCCGTTGAACTGATTGCTAGAGGCAGAGGAATTGCAGCACTAGAACTCCT CGATGCTAATGGATATGTGATTGAGTCGGGCTGTAAAGCGGAAATGGCCCAAGCCGCAGCAGATCAGTTCCTCGCACTCC CCCTCAAAGAACAAGAGGAAACCCTGATTATCGCTGGCACCAATGAGGAACGACTCGATACGGAGCAAGCCATTCGTTGG GGTGAGAAACAAGCGGGACGGCTAGGGGAATCCAGCAAGATTGTTCAGCTCAAGTCTCGCAACCTGAGTATCGAACAAAA GCGACGGGCGGATTGGTATCGAAAAGGGGATTACGTTCGGCTACTGCAAACATCGAAGACATCATCCATCAAACGGGGAC AGCTCTACAAGGTGGAGAAGCGAGAGGGAGATGAGCTGGTGGTATCTTCCTTTGGCGGTCGGCTCTATCGATTCAAACCC GCGAAATACAAACTAAAGGAGGTCTACAGTGCCCATAAATTTGATGTGGCCGTTGGAGATAAGTTGCGGTGGACGACAAC GATCAAAGAAAACAACTGGATTAACGGTCAGCAGCTCACGGTCACCGCCCTCGATGGCTTGAATATGAAGGTCAGGGACC ATGAGGGACGTTCCCATGATGTGCCACTGACGCAACCGCTTGCCTTGGAGTATGACCGGGTGTGGACTTCCTACCGCTCC CAGAGTGGCACGAAGAAACGGACGATTGTCATCACCACGAATGACCGGACCTCAAGCCGAGAGCCGTTCCTCGTCGATAT TTCCCGACAAGAACATGAATTGACTGTCTATACCGAGAGCCTGAACAAACTCAGAAACCGAGTCGCCAAATCCAATGCTC AAAAAAGTGCTTTAGATCTAATCGAGGGAACCTATGGAAACCAACGAACAACAACAACAGAACGTCAACAATCAACAGCA GATCATCAACAATCAACAGCAGATCATCAACGAGCTTCGAGTCCAGTTAGCCCCACTCACGGACGCGATCACCATCTTGA CCAATCAAGTCGAAGAGGTCCAAACTCAGAACCAACACATCCTCGACGAAAACAGAGAACTCAAGTCCCAGGTCAGGGAG CGGATCAACACCATCCCAATGGAAGTCAAAGCCGTTCTCAACCTATTTATCCAGGAGTTCAAGGAGGCGATGGCATCCAA GAAACCCTCGGATATGAGCGAGAGCATCAAGGAACTCGCCAAGGCAATGGACAACTTAAGGATGAAAATCGAGGATACCA GCGTGTTGCAGTTGACGATGAGCGACAAGGTATTGGAGGCCGCAGAGGAAATTATGCAGATCAAGAACAAGCTCCCCCGA CACGCCCCACCCAAGACGGTCGCTCAACAGAATGGGGGTCAACCTCCTCAGACCTAGCAAACTGGGTGATGCAATGGTCT GAGGAGCAAGAGCTTGCAGCAAGTGGGTTAGGTGAACACCTGCTAGCCCTCTCTCAAAGCATAAACAGACTGAGTGAAAA TCTCGATAATGTTTCTTTTAATGGCCTGGGCGAATTGGCTGAAGTCGTAGTAAGGGAGCTAGAACAACAAGCCCTCGCCC AGAACCTTACTCATATTGCCCAATCCATTGACCAGATTGACCAGACCATCGAACAGACGGTTAGACAGCAAAGGATCAGG AGCATTGCCGATGCTGTCACAGAATGGCGAACGGGCCAGGAGCTGGCAAATGCCGTCACCGAAATGGTGAATGTCCTGAC TCAGGGCACTGAAGGGCTAGACCGGGCAATCATCCGACTCCAAGCCGGGATTGAAGCCACCCAATCTCTGGATGTCCAAT TCCCCGCAATGGCTGAATTGGTCGATGCCGTTCATGATTGGCAAACTGAGGTGGAAGTCTCTGCGGTCATGGGCGAAGTG CAGGACTTGGTTGCGTCAATCACGGTGCCCCAATTCCTGGGCATGGATGACCTGGCTCAGGATGTCCATGCCCTCAACGA AGAACAAGCCTTGGCTGAGAGTGGCTTGATTGAGCAGTTAGCTGAGTTGACCACTCAGATTAACGAGTTGGTTGAACCCC AGCAAGTTCAGTTTGAGGGCATAACTCAGTTGGCCGAAGTGGTGAGCGAACTCCAGCAGGGGCAATCCCTCGCTCAGGTG CAACCTCAGCTCCAGGCCATCACCCAGCAGATTGAAGCGTTTAACGCCAAGCAACCCACTTTTTCTTTTGCCAGAATCAA GGAGCTGGCCGATACCGTCAGTGAATGGAGGGCACATGAGTCCATTGCTCAGCACATTGGCGCACTCAATGATCTAACCG TTCGCGCTCAACGAAGTCTGAGAATCTTCCCAGCTATGCTGCAATTGGCTAAATCCGTGAAGGCGATGCGCTCAGTGGAT GCACTCATGAATGGGCCAGTCGCAAATCAGCTCAAGGAAGTCGCCCAACAGTTGACAGACAAGGGAATAAGCGTCACTCC TAAGCCCAAAACCATTGATGATCAGGTGTTCTGGACACCCGACTATGAGGGAGTGGCGCGGCCAGACTACATTGATGAAA AACACTGGAATGAATGGGTGTCTAGTTGTGCCCATCCTGATGTGATTGCCGCTCGGCTCCAATCCATCGCCGATGATCAG GTGATTGATCGGTTGCTGGGAGCCAAGATTGAAGACATCGCCACTCGTAGACGGGATGGGTCTTTCAAGACGGTTCGTAC TCAATATCCCATTAAAGCGATTCGGTCTTTGATTAATGAGCGGTCTCATCCTGAAGTGTTGAGCTATCAAGAGCTAGCTG AAGGTGGGGGCTGGTGGGCTGATGCTGGAGTGGATCCGCTGTCCTTTGAAGAACTTGGCCCCAATGAGGAACCCACACTG AGTCTATATGGAACGTTTAAACCTGATACTCCCCGCATTGACGTAGACAAGACCCGCAGAGCTAGGGCTAAAAACCCCAA TGCCCCAACCAAATATCGCAAGTATGAGAATCCATTGGGAACCAAGCGCGAATTGTTCGAGCGAGACATGGCATTCCAAC CCGTCCCAGACCATATCGCTGAGCGGATCTTTGCCAAGTATGGTGTCACCCAAACCCAGGAGGAGAAAGCCAAGGGATTC TGGTACACGGTCTACAAGCATCCTGAGATTCCCATCTACCGGACTGAAGGCGATAAAAAAGATGCGGCATTAGTCTCTCA AGGAAGAGTCGTCATTGGTGGTCAGGGGGTCAACATCGGCTATCGGGCCAAGAACCAGCACGATGAAAAGCTCGAAAGAA GAGTACTGCACCCTCAGCTAGACGTGTTTGCGGTTCCAGGCAGAGAGTTCAGGTATGCCCATGACTGGGATTCTGAGCAG TCCACGGTCTGGAACGTTCGCCGTGAAATGGTCAGAGAGGCTGAACTCATTGAAGAAAGAGACTGCAAGACATGGAGAAT TCCTTGGGATTCTGAGAAAGGGAAAGGCGTCGATGACCTGATCGCTAATCATGGCCCCATCGCCTTTGAGCGGGCCGACA AGAATGCCTATCCGATGGAGCGGGAAATCACGATGCACTATCGGGGCCAGTACACCCAGATTAAGAAGCGATTAAATCGT CACTTTGGATGCGCGGTCCACGATATTCCCATTTACCTAGAAGCGATGAAGGATGGGGACGAGATGGATGGCATTCGGGT CCTATGGGAGTCTTCCACTGCCCGGTCCTTCCAGCATTACCATGACAAGCAGCACTATATCGAGGGCATCATCAAACTCT CGGATGCCTATCGTAGACTCGTCAGAAAAGACGGTGACCCCAAGGCCATGCAAATCCTCGTCAACAGACTAAAAAAGCCC CGACCCATTATCAAGGTCGAGGCCAGAAGTCGGAATATAAAACGAGGCTATGGACGTTAG
Upstream 100 bases:
>100_bases TTCACTGCAGTTATTCCCATGCTTAAAACTTTCCTGAAGCGTCTGAACCGCTGAATCAAAGGCCGATGTCATGAAGACGA TGCGGACCATCTATGGAGAG
Downstream 100 bases:
>100_bases TCTACACGACGGGAGTTAATCACCGTACCACCGTAAGGACTAATCCAATCAGACCCCGGCATGGGAGGTGGGCCTGGAAC AATCTCAGTGCGCCTCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA helicase I [H]
Number of amino acids: Translated: 1859; Mature: 1859
Protein sequence:
>1859_residues MIDYYDEDESLVDAPERYYSESEVITDIDRMSTAVWVGSNAIVQKLGTYVKREDFKALSRGFLPESLKSVAGGAVQRIRG KKPNEEDKERLAHDLVLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIAALMPH HTSRDGDMQLHTHMLIMNGTEGPDGRWRSLSHEKLAQAKWIGSFYRQKLAEKVQRLGYRIYQTKDAFELVGYDRSDVEVF SKRHRAIVKAVQKEGLEVTPENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVLAEPLAVMPDPDRARYEVE SAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAIKQSKELIPVDRGFTTVTAVEEEAQIHQRWMEGQGQAQPMV AHPSLLGISVELNEDQAKAILNTLSSSDRYQIWQGFPGVGKSRTLGVLKTLLNGSGLSIRGFSPTIPAAKKLQDELGITT NTVEHLVLHKVEDSPNQVWLIDEAGMMSRRQMKVILEKAEPIGAQVIFVGDAGQNSAIEAGNPFKFMQANGATTHRIEEI VRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKAEMAQAAADQFLALPLKEQEETLIIAGTNEERLDTEQAIRW GEKQAGRLGESSKIVQLKSRNLSIEQKRRADWYRKGDYVRLLQTSKTSSIKRGQLYKVEKREGDELVVSSFGGRLYRFKP AKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHDVPLTQPLALEYDRVWTSYRS QSGTKKRTIVITTNDRTSSREPFLVDISRQEHELTVYTESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTTERQQSTA DHQQSTADHQRASSPVSPTHGRDHHLDQSSRRGPNSEPTHPRRKQRTQVPGQGADQHHPNGSQSRSQPIYPGVQGGDGIQ ETLGYEREHQGTRQGNGQLKDENRGYQRVAVDDERQGIGGRRGNYADQEQAPPTRPTQDGRSTEWGSTSSDLANWVMQWS EEQELAASGLGEHLLALSQSINRLSENLDNVSFNGLGELAEVVVRELEQQALAQNLTHIAQSIDQIDQTIEQTVRQQRIR SIADAVTEWRTGQELANAVTEMVNVLTQGTEGLDRAIIRLQAGIEATQSLDVQFPAMAELVDAVHDWQTEVEVSAVMGEV QDLVASITVPQFLGMDDLAQDVHALNEEQALAESGLIEQLAELTTQINELVEPQQVQFEGITQLAEVVSELQQGQSLAQV QPQLQAITQQIEAFNAKQPTFSFARIKELADTVSEWRAHESIAQHIGALNDLTVRAQRSLRIFPAMLQLAKSVKAMRSVD ALMNGPVANQLKEVAQQLTDKGISVTPKPKTIDDQVFWTPDYEGVARPDYIDEKHWNEWVSSCAHPDVIAARLQSIADDQ VIDRLLGAKIEDIATRRRDGSFKTVRTQYPIKAIRSLINERSHPEVLSYQELAEGGGWWADAGVDPLSFEELGPNEEPTL SLYGTFKPDTPRIDVDKTRRARAKNPNAPTKYRKYENPLGTKRELFERDMAFQPVPDHIAERIFAKYGVTQTQEEKAKGF WYTVYKHPEIPIYRTEGDKKDAALVSQGRVVIGGQGVNIGYRAKNQHDEKLERRVLHPQLDVFAVPGREFRYAHDWDSEQ STVWNVRREMVREAELIEERDCKTWRIPWDSEKGKGVDDLIANHGPIAFERADKNAYPMEREITMHYRGQYTQIKKRLNR HFGCAVHDIPIYLEAMKDGDEMDGIRVLWESSTARSFQHYHDKQHYIEGIIKLSDAYRRLVRKDGDPKAMQILVNRLKKP RPIIKVEARSRNIKRGYGR
Sequences:
>Translated_1859_residues MIDYYDEDESLVDAPERYYSESEVITDIDRMSTAVWVGSNAIVQKLGTYVKREDFKALSRGFLPESLKSVAGGAVQRIRG KKPNEEDKERLAHDLVLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIAALMPH HTSRDGDMQLHTHMLIMNGTEGPDGRWRSLSHEKLAQAKWIGSFYRQKLAEKVQRLGYRIYQTKDAFELVGYDRSDVEVF SKRHRAIVKAVQKEGLEVTPENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVLAEPLAVMPDPDRARYEVE SAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAIKQSKELIPVDRGFTTVTAVEEEAQIHQRWMEGQGQAQPMV AHPSLLGISVELNEDQAKAILNTLSSSDRYQIWQGFPGVGKSRTLGVLKTLLNGSGLSIRGFSPTIPAAKKLQDELGITT NTVEHLVLHKVEDSPNQVWLIDEAGMMSRRQMKVILEKAEPIGAQVIFVGDAGQNSAIEAGNPFKFMQANGATTHRIEEI VRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKAEMAQAAADQFLALPLKEQEETLIIAGTNEERLDTEQAIRW GEKQAGRLGESSKIVQLKSRNLSIEQKRRADWYRKGDYVRLLQTSKTSSIKRGQLYKVEKREGDELVVSSFGGRLYRFKP AKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHDVPLTQPLALEYDRVWTSYRS QSGTKKRTIVITTNDRTSSREPFLVDISRQEHELTVYTESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTTERQQSTA DHQQSTADHQRASSPVSPTHGRDHHLDQSSRRGPNSEPTHPRRKQRTQVPGQGADQHHPNGSQSRSQPIYPGVQGGDGIQ ETLGYEREHQGTRQGNGQLKDENRGYQRVAVDDERQGIGGRRGNYADQEQAPPTRPTQDGRSTEWGSTSSDLANWVMQWS EEQELAASGLGEHLLALSQSINRLSENLDNVSFNGLGELAEVVVRELEQQALAQNLTHIAQSIDQIDQTIEQTVRQQRIR SIADAVTEWRTGQELANAVTEMVNVLTQGTEGLDRAIIRLQAGIEATQSLDVQFPAMAELVDAVHDWQTEVEVSAVMGEV QDLVASITVPQFLGMDDLAQDVHALNEEQALAESGLIEQLAELTTQINELVEPQQVQFEGITQLAEVVSELQQGQSLAQV QPQLQAITQQIEAFNAKQPTFSFARIKELADTVSEWRAHESIAQHIGALNDLTVRAQRSLRIFPAMLQLAKSVKAMRSVD ALMNGPVANQLKEVAQQLTDKGISVTPKPKTIDDQVFWTPDYEGVARPDYIDEKHWNEWVSSCAHPDVIAARLQSIADDQ VIDRLLGAKIEDIATRRRDGSFKTVRTQYPIKAIRSLINERSHPEVLSYQELAEGGGWWADAGVDPLSFEELGPNEEPTL SLYGTFKPDTPRIDVDKTRRARAKNPNAPTKYRKYENPLGTKRELFERDMAFQPVPDHIAERIFAKYGVTQTQEEKAKGF WYTVYKHPEIPIYRTEGDKKDAALVSQGRVVIGGQGVNIGYRAKNQHDEKLERRVLHPQLDVFAVPGREFRYAHDWDSEQ STVWNVRREMVREAELIEERDCKTWRIPWDSEKGKGVDDLIANHGPIAFERADKNAYPMEREITMHYRGQYTQIKKRLNR HFGCAVHDIPIYLEAMKDGDEMDGIRVLWESSTARSFQHYHDKQHYIEGIIKLSDAYRRLVRKDGDPKAMQILVNRLKKP RPIIKVEARSRNIKRGYGR >Mature_1859_residues MIDYYDEDESLVDAPERYYSESEVITDIDRMSTAVWVGSNAIVQKLGTYVKREDFKALSRGFLPESLKSVAGGAVQRIRG KKPNEEDKERLAHDLVLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIAALMPH HTSRDGDMQLHTHMLIMNGTEGPDGRWRSLSHEKLAQAKWIGSFYRQKLAEKVQRLGYRIYQTKDAFELVGYDRSDVEVF SKRHRAIVKAVQKEGLEVTPENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVLAEPLAVMPDPDRARYEVE SAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAIKQSKELIPVDRGFTTVTAVEEEAQIHQRWMEGQGQAQPMV AHPSLLGISVELNEDQAKAILNTLSSSDRYQIWQGFPGVGKSRTLGVLKTLLNGSGLSIRGFSPTIPAAKKLQDELGITT NTVEHLVLHKVEDSPNQVWLIDEAGMMSRRQMKVILEKAEPIGAQVIFVGDAGQNSAIEAGNPFKFMQANGATTHRIEEI VRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKAEMAQAAADQFLALPLKEQEETLIIAGTNEERLDTEQAIRW GEKQAGRLGESSKIVQLKSRNLSIEQKRRADWYRKGDYVRLLQTSKTSSIKRGQLYKVEKREGDELVVSSFGGRLYRFKP AKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHDVPLTQPLALEYDRVWTSYRS QSGTKKRTIVITTNDRTSSREPFLVDISRQEHELTVYTESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTTERQQSTA DHQQSTADHQRASSPVSPTHGRDHHLDQSSRRGPNSEPTHPRRKQRTQVPGQGADQHHPNGSQSRSQPIYPGVQGGDGIQ ETLGYEREHQGTRQGNGQLKDENRGYQRVAVDDERQGIGGRRGNYADQEQAPPTRPTQDGRSTEWGSTSSDLANWVMQWS EEQELAASGLGEHLLALSQSINRLSENLDNVSFNGLGELAEVVVRELEQQALAQNLTHIAQSIDQIDQTIEQTVRQQRIR SIADAVTEWRTGQELANAVTEMVNVLTQGTEGLDRAIIRLQAGIEATQSLDVQFPAMAELVDAVHDWQTEVEVSAVMGEV QDLVASITVPQFLGMDDLAQDVHALNEEQALAESGLIEQLAELTTQINELVEPQQVQFEGITQLAEVVSELQQGQSLAQV QPQLQAITQQIEAFNAKQPTFSFARIKELADTVSEWRAHESIAQHIGALNDLTVRAQRSLRIFPAMLQLAKSVKAMRSVD ALMNGPVANQLKEVAQQLTDKGISVTPKPKTIDDQVFWTPDYEGVARPDYIDEKHWNEWVSSCAHPDVIAARLQSIADDQ VIDRLLGAKIEDIATRRRDGSFKTVRTQYPIKAIRSLINERSHPEVLSYQELAEGGGWWADAGVDPLSFEELGPNEEPTL SLYGTFKPDTPRIDVDKTRRARAKNPNAPTKYRKYENPLGTKRELFERDMAFQPVPDHIAERIFAKYGVTQTQEEKAKGF WYTVYKHPEIPIYRTEGDKKDAALVSQGRVVIGGQGVNIGYRAKNQHDEKLERRVLHPQLDVFAVPGREFRYAHDWDSEQ STVWNVRREMVREAELIEERDCKTWRIPWDSEKGKGVDDLIANHGPIAFERADKNAYPMEREITMHYRGQYTQIKKRLNR HFGCAVHDIPIYLEAMKDGDEMDGIRVLWESSTARSFQHYHDKQHYIEGIIKLSDAYRRLVRKDGDPKAMQILVNRLKKP RPIIKVEARSRNIKRGYGR
Specific function: TraI has been identified as DNA helicase I and it also has an additional activity of site-specific nicking at oriT. DNA helicase I is a potent DNA-dependent ATPase [H]
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To traI of plasmid IncFII R100 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014059 - InterPro: IPR014129 - InterPro: IPR009767 - InterPro: IPR014862 [H]
Pfam domain/function: PF07057 TraI; PF08751 TrwC [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 210154; Mature: 210154
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00024 HEMOPEXIN ; PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYYDEDESLVDAPERYYSESEVITDIDRMSTAVWVGSNAIVQKLGTYVKREDFKALSR CCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHH GFLPESLKSVAGGAVQRIRGKKPNEEDKERLAHDLVLSAPKSVSMALHLEGDNRIFDAHM CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH EAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIAALMPHHTSRDGDMQLHTHMLIMNGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEEEEECC EGPDGRWRSLSHEKLAQAKWIGSFYRQKLAEKVQRLGYRIYQTKDAFELVGYDRSDVEVF CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHH SKRHRAIVKAVQKEGLEVTPENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHP HHHHHHHHHHHHHCCCEECCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC VLAEPLAVMPDPDRARYEVESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAI HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH KQSKELIPVDRGFTTVTAVEEEAQIHQRWMEGQGQAQPMVAHPSLLGISVELNEDQAKAI HHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEEECCHHHHHH LNTLSSSDRYQIWQGFPGVGKSRTLGVLKTLLNGSGLSIRGFSPTIPAAKKLQDELGITT HHHHCCCCCEEHCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCH NTVEHLVLHKVEDSPNQVWLIDEAGMMSRRQMKVILEKAEPIGAQVIFVGDAGQNSAIEA HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC GNPFKFMQANGATTHRIEEIVRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKA CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCHH EMAQAAADQFLALPLKEQEETLIIAGTNEERLDTEQAIRWGEKQAGRLGESSKIVQLKSR HHHHHHHHHHEECCCCCCCCEEEEECCCHHHCCHHHHHHCCHHHHCCCCCCCCEEEECCC NLSIEQKRRADWYRKGDYVRLLQTSKTSSIKRGQLYKVEKREGDELVVSSFGGRLYRFKP CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEHHHCCCEEEEECC AKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHD HHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCC VPLTQPLALEYDRVWTSYRSQSGTKKRTIVITTNDRTSSREPFLVDISRQEHELTVYTES CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEHHH LNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTTERQQSTADHQQSTADHQRASSPVSPTH HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRDHHLDQSSRRGPNSEPTHPRRKQRTQVPGQGADQHHPNGSQSRSQPIYPGVQGGDGIQ CCCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ETLGYEREHQGTRQGNGQLKDENRGYQRVAVDDERQGIGGRRGNYADQEQAPPTRPTQDG HHHCCCHHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCC RSTEWGSTSSDLANWVMQWSEEQELAASGLGEHLLALSQSINRLSENLDNVSFNGLGELA CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EVVVRELEQQALAQNLTHIAQSIDQIDQTIEQTVRQQRIRSIADAVTEWRTGQELANAVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EMVNVLTQGTEGLDRAIIRLQAGIEATQSLDVQFPAMAELVDAVHDWQTEVEVSAVMGEV HHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QDLVASITVPQFLGMDDLAQDVHALNEEQALAESGLIEQLAELTTQINELVEPQQVQFEG HHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ITQLAEVVSELQQGQSLAQVQPQLQAITQQIEAFNAKQPTFSFARIKELADTVSEWRAHE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SIAQHIGALNDLTVRAQRSLRIFPAMLQLAKSVKAMRSVDALMNGPVANQLKEVAQQLTD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KGISVTPKPKTIDDQVFWTPDYEGVARPDYIDEKHWNEWVSSCAHPDVIAARLQSIADDQ CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHH VIDRLLGAKIEDIATRRRDGSFKTVRTQYPIKAIRSLINERSHPEVLSYQELAEGGGWWA HHHHHHCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEC DAGVDPLSFEELGPNEEPTLSLYGTFKPDTPRIDVDKTRRARAKNPNAPTKYRKYENPLG CCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCC TKRELFERDMAFQPVPDHIAERIFAKYGVTQTQEEKAKGFWYTVYKHPEIPIYRTEGDKK HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCEEECCCCCH DAALVSQGRVVIGGQGVNIGYRAKNQHDEKLERRVLHPQLDVFAVPGREFRYAHDWDSEQ HHHHHHCCCEEECCCCCEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCH STVWNVRREMVREAELIEERDCKTWRIPWDSEKGKGVDDLIANHGPIAFERADKNAYPME HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC REITMHYRGQYTQIKKRLNRHFGCAVHDIPIYLEAMKDGDEMDGIRVLWESSTARSFQHY CEEEEEECCCHHHHHHHHHHHHCCEEECCHHHEEECCCCCCCCCEEEEECCCHHHHHHHH HDKQHYIEGIIKLSDAYRRLVRKDGDPKAMQILVNRLKKPRPIIKVEARSRNIKRGYGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MIDYYDEDESLVDAPERYYSESEVITDIDRMSTAVWVGSNAIVQKLGTYVKREDFKALSR CCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHH GFLPESLKSVAGGAVQRIRGKKPNEEDKERLAHDLVLSAPKSVSMALHLEGDNRIFDAHM CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH EAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIAALMPHHTSRDGDMQLHTHMLIMNGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEEEEECC EGPDGRWRSLSHEKLAQAKWIGSFYRQKLAEKVQRLGYRIYQTKDAFELVGYDRSDVEVF CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHH SKRHRAIVKAVQKEGLEVTPENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHP HHHHHHHHHHHHHCCCEECCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC VLAEPLAVMPDPDRARYEVESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAI HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH KQSKELIPVDRGFTTVTAVEEEAQIHQRWMEGQGQAQPMVAHPSLLGISVELNEDQAKAI HHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEEECCHHHHHH LNTLSSSDRYQIWQGFPGVGKSRTLGVLKTLLNGSGLSIRGFSPTIPAAKKLQDELGITT HHHHCCCCCEEHCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCH NTVEHLVLHKVEDSPNQVWLIDEAGMMSRRQMKVILEKAEPIGAQVIFVGDAGQNSAIEA HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC GNPFKFMQANGATTHRIEEIVRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKA CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCHH EMAQAAADQFLALPLKEQEETLIIAGTNEERLDTEQAIRWGEKQAGRLGESSKIVQLKSR HHHHHHHHHHEECCCCCCCCEEEEECCCHHHCCHHHHHHCCHHHHCCCCCCCCEEEECCC NLSIEQKRRADWYRKGDYVRLLQTSKTSSIKRGQLYKVEKREGDELVVSSFGGRLYRFKP CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEHHHCCCEEEEECC AKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHD HHHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCC VPLTQPLALEYDRVWTSYRSQSGTKKRTIVITTNDRTSSREPFLVDISRQEHELTVYTES CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEHHH LNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTTERQQSTADHQQSTADHQRASSPVSPTH HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRDHHLDQSSRRGPNSEPTHPRRKQRTQVPGQGADQHHPNGSQSRSQPIYPGVQGGDGIQ CCCCCCCCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ETLGYEREHQGTRQGNGQLKDENRGYQRVAVDDERQGIGGRRGNYADQEQAPPTRPTQDG HHHCCCHHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCC RSTEWGSTSSDLANWVMQWSEEQELAASGLGEHLLALSQSINRLSENLDNVSFNGLGELA CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EVVVRELEQQALAQNLTHIAQSIDQIDQTIEQTVRQQRIRSIADAVTEWRTGQELANAVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH EMVNVLTQGTEGLDRAIIRLQAGIEATQSLDVQFPAMAELVDAVHDWQTEVEVSAVMGEV HHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QDLVASITVPQFLGMDDLAQDVHALNEEQALAESGLIEQLAELTTQINELVEPQQVQFEG HHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ITQLAEVVSELQQGQSLAQVQPQLQAITQQIEAFNAKQPTFSFARIKELADTVSEWRAHE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SIAQHIGALNDLTVRAQRSLRIFPAMLQLAKSVKAMRSVDALMNGPVANQLKEVAQQLTD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KGISVTPKPKTIDDQVFWTPDYEGVARPDYIDEKHWNEWVSSCAHPDVIAARLQSIADDQ CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHH VIDRLLGAKIEDIATRRRDGSFKTVRTQYPIKAIRSLINERSHPEVLSYQELAEGGGWWA HHHHHHCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEC DAGVDPLSFEELGPNEEPTLSLYGTFKPDTPRIDVDKTRRARAKNPNAPTKYRKYENPLG CCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCC TKRELFERDMAFQPVPDHIAERIFAKYGVTQTQEEKAKGFWYTVYKHPEIPIYRTEGDKK HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCEEECCCCCH DAALVSQGRVVIGGQGVNIGYRAKNQHDEKLERRVLHPQLDVFAVPGREFRYAHDWDSEQ HHHHHHCCCEEECCCCCEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCH STVWNVRREMVREAELIEERDCKTWRIPWDSEKGKGVDDLIANHGPIAFERADKNAYPME HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC REITMHYRGQYTQIKKRLNRHFGCAVHDIPIYLEAMKDGDEMDGIRVLWESSTARSFQHY CEEEEEECCCHHHHHHHHHHHHCCEEECCHHHEEECCCCCCCCCEEEEECCCHHHHHHHH HDKQHYIEGIIKLSDAYRRLVRKDGDPKAMQILVNRLKKPRPIIKVEARSRNIKRGYGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2163400; 7915817; 2680768; 2164585; 8736534 [H]