Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340447
Identifier: 158340447
GI number: 158340447
Start: 260757
End: 261875
Strand: Reverse
Name: 158340447
Synonym: AM1_C0375
Alternate gene names: NA
Gene position: 261875-260757 (Counterclockwise)
Preceding gene: 158340449
Following gene: 158340445
Centisome position: 95.88
GC content: 51.56
Gene sequence:
>1119_bases ATGACTACAAAAATATTTTTGACGGTCGATGTCGGTGCAAGTTTGACCAAAGCCTTCTTGCAAATTGCACCGGATGGCAA GCTTCCGATTGAGGAATGTATTACACAACCATCTGCTGTCCTCAGAACAACCGAGAGTCTGTATGAGGAGTCGGACCACG ACAACTCCGCTCACAGTTCTCTCCTTGGCTATGGAGGGATGTACTGGCAGACGGGCCAGATTGCCGAAACCAATCTCAGG CAGACGAATACAGATCAGCACAAGCACCCTGAAGCGATTGCCAAGGTGCTGTCGATTGCGGGGTATGCCATCTCGAAGGC TGGGAATGGTTGCGAGATGTATTTGGACTTGCTCTTGCCTCAGAGTGAGGAGCCAAGCTTTGCCCAGATGAAGCGAGATT TGGCGAAGTACGTCAGCAAGTTTTTGTACGGGCCGAAGCAACTGACCTGTGCGCCGAGGTTTGTGAATGTCTTGCCAGAG AGTGCGGGAATCGTCTCGTATGCCAAGGTCTACCCCTCGATTATTCTGATGTTTGGTCACAAGGACTTCACTTTGACGAA GGTCAAGGATGAGCATAGTGGCTTGGGCTATATCCAGACCTGGGCTGGACGAGGCTCATTGATGATTCAGCACCATATGA ACTGGACACCATCGAATGAGCTGACGGGTGCCAAGCTGATTTTTTCCCAGGGGGTTGGCCAGAAAGGGCTTGAGAAGACA TTGGGTGAGAAAGCTGGCCCCATCGTGGCTTCCTTACGCCAAGCTAGGGATCTGTACTGGGTGAATCTCCAGCATCAATT GAGTAGTGACATAGATGTGGTGCAAGCCAAGCGCATCTATGTTGCGGGAGGGGGTGCGCCCGCCTGGTCTAAGCAGCTCA AGGAATTCTTTAGTGGCAAGATGGACTCCCTAGGCCCTGTGATTCGCACTATTGGTCAGGAATTCCCAGAATGGTCAAAG TCTCCGATGACCTACCGTCTGACGGATGCCTATCTGGTATGGCGGCAGAGTGCAGATCGTCCTGAAACGTTGCAAGCTCC CCCCACTCGTAAAAGTGTCAAGACAACCAAGACTACTAAGTCAGCTAAGCGTGCAAAAGCGGAGGTGAGCAATGTCTGA
Upstream 100 bases:
>100_bases AATAGGGCTTTCGAGTACCTAAACGACCCCCAATCGACCCCCAAAAACCGCAATTTTGGCGGGGGTACATTACCTTGACC AAACCGATAGGTTTTTCAAC
Downstream 100 bases:
>100_bases TATCTATTTCAAGGTAAAGACTCAGTGGAAACTCACCTCTGAGCGAGGGGTAATTGTCAAAACGGTTCGCAATCACTACG GCCCTGGACCCAGTTTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTTKIFLTVDVGASLTKAFLQIAPDGKLPIEECITQPSAVLRTTESLYEESDHDNSAHSSLLGYGGMYWQTGQIAETNLR QTNTDQHKHPEAIAKVLSIAGYAISKAGNGCEMYLDLLLPQSEEPSFAQMKRDLAKYVSKFLYGPKQLTCAPRFVNVLPE SAGIVSYAKVYPSIILMFGHKDFTLTKVKDEHSGLGYIQTWAGRGSLMIQHHMNWTPSNELTGAKLIFSQGVGQKGLEKT LGEKAGPIVASLRQARDLYWVNLQHQLSSDIDVVQAKRIYVAGGGAPAWSKQLKEFFSGKMDSLGPVIRTIGQEFPEWSK SPMTYRLTDAYLVWRQSADRPETLQAPPTRKSVKTTKTTKSAKRAKAEVSNV
Sequences:
>Translated_372_residues MTTKIFLTVDVGASLTKAFLQIAPDGKLPIEECITQPSAVLRTTESLYEESDHDNSAHSSLLGYGGMYWQTGQIAETNLR QTNTDQHKHPEAIAKVLSIAGYAISKAGNGCEMYLDLLLPQSEEPSFAQMKRDLAKYVSKFLYGPKQLTCAPRFVNVLPE SAGIVSYAKVYPSIILMFGHKDFTLTKVKDEHSGLGYIQTWAGRGSLMIQHHMNWTPSNELTGAKLIFSQGVGQKGLEKT LGEKAGPIVASLRQARDLYWVNLQHQLSSDIDVVQAKRIYVAGGGAPAWSKQLKEFFSGKMDSLGPVIRTIGQEFPEWSK SPMTYRLTDAYLVWRQSADRPETLQAPPTRKSVKTTKTTKSAKRAKAEVSNV >Mature_371_residues TTKIFLTVDVGASLTKAFLQIAPDGKLPIEECITQPSAVLRTTESLYEESDHDNSAHSSLLGYGGMYWQTGQIAETNLRQ TNTDQHKHPEAIAKVLSIAGYAISKAGNGCEMYLDLLLPQSEEPSFAQMKRDLAKYVSKFLYGPKQLTCAPRFVNVLPES AGIVSYAKVYPSIILMFGHKDFTLTKVKDEHSGLGYIQTWAGRGSLMIQHHMNWTPSNELTGAKLIFSQGVGQKGLEKTL GEKAGPIVASLRQARDLYWVNLQHQLSSDIDVVQAKRIYVAGGGAPAWSKQLKEFFSGKMDSLGPVIRTIGQEFPEWSKS PMTYRLTDAYLVWRQSADRPETLQAPPTRKSVKTTKTTKSAKRAKAEVSNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41147; Mature: 41016
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKIFLTVDVGASLTKAFLQIAPDGKLPIEECITQPSAVLRTTESLYEESDHDNSAHSS CCEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH LLGYGGMYWQTGQIAETNLRQTNTDQHKHPEAIAKVLSIAGYAISKAGNGCEMYLDLLLP HHHCCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC QSEEPSFAQMKRDLAKYVSKFLYGPKQLTCAPRFVNVLPESAGIVSYAKVYPSIILMFGH CCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHCCCCCCHHHHHHHHHHHEEEECC KDFTLTKVKDEHSGLGYIQTWAGRGSLMIQHHMNWTPSNELTGAKLIFSQGVGQKGLEKT CCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHH LGEKAGPIVASLRQARDLYWVNLQHQLSSDIDVVQAKRIYVAGGGAPAWSKQLKEFFSGK HHHHCCHHHHHHHHHCCEEEEEEHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC MDSLGPVIRTIGQEFPEWSKSPMTYRLTDAYLVWRQSADRPETLQAPPTRKSVKTTKTTK CHHHHHHHHHHHHHCCCCCCCCCEEEEHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHH SAKRAKAEVSNV HHHHHHHHHCCC >Mature Secondary Structure TTKIFLTVDVGASLTKAFLQIAPDGKLPIEECITQPSAVLRTTESLYEESDHDNSAHSS CEEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHH LLGYGGMYWQTGQIAETNLRQTNTDQHKHPEAIAKVLSIAGYAISKAGNGCEMYLDLLLP HHHCCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC QSEEPSFAQMKRDLAKYVSKFLYGPKQLTCAPRFVNVLPESAGIVSYAKVYPSIILMFGH CCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHCCCCCCHHHHHHHHHHHEEEECC KDFTLTKVKDEHSGLGYIQTWAGRGSLMIQHHMNWTPSNELTGAKLIFSQGVGQKGLEKT CCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHH LGEKAGPIVASLRQARDLYWVNLQHQLSSDIDVVQAKRIYVAGGGAPAWSKQLKEFFSGK HHHHCCHHHHHHHHHCCEEEEEEHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC MDSLGPVIRTIGQEFPEWSKSPMTYRLTDAYLVWRQSADRPETLQAPPTRKSVKTTKTTK CHHHHHHHHHHHHHCCCCCCCCCEEEEHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHH SAKRAKAEVSNV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA