Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340445
Identifier: 158340445
GI number: 158340445
Start: 260366
End: 260764
Strand: Reverse
Name: 158340445
Synonym: AM1_C0373
Alternate gene names: NA
Gene position: 260764-260366 (Counterclockwise)
Preceding gene: 158340447
Following gene: 158340444
Centisome position: 95.48
GC content: 50.13
Gene sequence:
>399_bases ATGTCTGATATCTATTTCAAGGTAAAGACTCAGTGGAAACTCACCTCTGAGCGAGGGGTAATTGTCAAAACGGTTCGCAA TCACTACGGCCCTGGACCCAGTTTTACCCGGCTATGCATGGACATTATGTTTTCTGTGCTAAAGGTGCTGTCTGTCGCCA TCCAGACTCGTAATCGAGCTGCGATTCAAGGGGCTATTGAAGTTTCTAGGGTCCAAGTTGAAGGCTATTACCAGATGGCT TTGGGGCTAGCTGAAGCAGAGGTGCCCCTACCCGTCATGGTTGCACCAACACTGAGTAACCCTGGTGGCACATTACCAGC GGAAGCCGATGACCTTGATGACACACCCCCTTGGGATGAGTCGCAAGCGGAATTTGAAGAGTTCGTTATGGACGACTGA
Upstream 100 bases:
>100_bases GCAGATCGTCCTGAAACGTTGCAAGCTCCCCCCACTCGTAAAAGTGTCAAGACAACCAAGACTACTAAGTCAGCTAAGCG TGCAAAAGCGGAGGTGAGCA
Downstream 100 bases:
>100_bases CCGCAAAAAAAAGTGAGGGGGCATATTCATATGTCCTCTCACTACCGATATCAAAACCCACGGTGGCATATTCACATGTC CCTTCTTTGCTGCCATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSDIYFKVKTQWKLTSERGVIVKTVRNHYGPGPSFTRLCMDIMFSVLKVLSVAIQTRNRAAIQGAIEVSRVQVEGYYQMA LGLAEAEVPLPVMVAPTLSNPGGTLPAEADDLDDTPPWDESQAEFEEFVMDD
Sequences:
>Translated_132_residues MSDIYFKVKTQWKLTSERGVIVKTVRNHYGPGPSFTRLCMDIMFSVLKVLSVAIQTRNRAAIQGAIEVSRVQVEGYYQMA LGLAEAEVPLPVMVAPTLSNPGGTLPAEADDLDDTPPWDESQAEFEEFVMDD >Mature_131_residues SDIYFKVKTQWKLTSERGVIVKTVRNHYGPGPSFTRLCMDIMFSVLKVLSVAIQTRNRAAIQGAIEVSRVQVEGYYQMAL GLAEAEVPLPVMVAPTLSNPGGTLPAEADDLDDTPPWDESQAEFEEFVMDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14639; Mature: 14508
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIYFKVKTQWKLTSERGVIVKTVRNHYGPGPSFTRLCMDIMFSVLKVLSVAIQTRNRA CCCEEEEEEEEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH AIQGAIEVSRVQVEGYYQMALGLAEAEVPLPVMVAPTLSNPGGTLPAEADDLDDTPPWDE HHHHHHEEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC SQAEFEEFVMDD CHHHHHHHHCCC >Mature Secondary Structure SDIYFKVKTQWKLTSERGVIVKTVRNHYGPGPSFTRLCMDIMFSVLKVLSVAIQTRNRA CCEEEEEEEEEEECCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH AIQGAIEVSRVQVEGYYQMALGLAEAEVPLPVMVAPTLSNPGGTLPAEADDLDDTPPWDE HHHHHHEEEEEEECHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC SQAEFEEFVMDD CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA