Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340444
Identifier: 158340444
GI number: 158340444
Start: 259577
End: 260218
Strand: Reverse
Name: 158340444
Synonym: AM1_C0372
Alternate gene names: NA
Gene position: 260218-259577 (Counterclockwise)
Preceding gene: 158340445
Following gene: 158340443
Centisome position: 95.28
GC content: 51.71
Gene sequence:
>642_bases ATGACGAATGCAACTGACCTAACCCAAACATTGGGCATTGAGCAAAATGACCTCGACAAGCTACTACGGGCCTGCGGAAT GAGCGAGGACGGCTATGATCTGGAGACCTTGCAGGGTGTCCTCCAGCTCAAGGCTGAAAACAACGCAGACACCTACACGC ATGGCTGGTGCATCTACACATCTGAGATGTATCAAGTGGACCTTAAGCCTATCCACAAGGCGATTTCTGCTGAAGGGATT GAGACAGGAGACGACCTATATCACCCACTGTTTATCCTCGTCTGTGAGCGTGTCTCTGAGGAAGGGGTTGACCCTGTTGA TGCGGTCAAAGCAGAGATGCGAGGGGTAGAAGAGGTACCACTGGTAGAATCTGCAATCCCCAGAGCTGAACTACCGGAAG TTCTGAAGCGGAAGATAGATCCGATTATCGACTTGGCGACGGAGAATACCATCCATCAGGTTGTACAAGTTTTGGGTGAG TTGGATGAAAGTGCCAACCGATACGTCAACGCCCGAATCCAGGCCAAAGCCGATGAAATTATGCAGCGTCCAGAGGTGGC TGCGCTAGTGAGTAAGCTAACGGCCAATCAACTGACGCCGGGAAAGCAGCCGCTCTTAAAAGCCACTGTGGTGGAGGAGT AG
Upstream 100 bases:
>100_bases ATATCAAAACCCACGGTGGCATATTCACATGTCCCTTCTTTGCTGCCATCAAAATCCACGGTGGCATATTCCACCAGCAC AACATTTGGAGAATTAAACA
Downstream 100 bases:
>100_bases CGTGGACTTTCGTGGGCGAAATGGTGTTCTCGTGGGTGATGAGCATTCTTGAGAACAACGAGCGGATTGAGGCCCTGCGA GAGCGCAAGCAAATTAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTNATDLTQTLGIEQNDLDKLLRACGMSEDGYDLETLQGVLQLKAENNADTYTHGWCIYTSEMYQVDLKPIHKAISAEGI ETGDDLYHPLFILVCERVSEEGVDPVDAVKAEMRGVEEVPLVESAIPRAELPEVLKRKIDPIIDLATENTIHQVVQVLGE LDESANRYVNARIQAKADEIMQRPEVAALVSKLTANQLTPGKQPLLKATVVEE
Sequences:
>Translated_213_residues MTNATDLTQTLGIEQNDLDKLLRACGMSEDGYDLETLQGVLQLKAENNADTYTHGWCIYTSEMYQVDLKPIHKAISAEGI ETGDDLYHPLFILVCERVSEEGVDPVDAVKAEMRGVEEVPLVESAIPRAELPEVLKRKIDPIIDLATENTIHQVVQVLGE LDESANRYVNARIQAKADEIMQRPEVAALVSKLTANQLTPGKQPLLKATVVEE >Mature_212_residues TNATDLTQTLGIEQNDLDKLLRACGMSEDGYDLETLQGVLQLKAENNADTYTHGWCIYTSEMYQVDLKPIHKAISAEGIE TGDDLYHPLFILVCERVSEEGVDPVDAVKAEMRGVEEVPLVESAIPRAELPEVLKRKIDPIIDLATENTIHQVVQVLGEL DESANRYVNARIQAKADEIMQRPEVAALVSKLTANQLTPGKQPLLKATVVEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23567; Mature: 23436
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNATDLTQTLGIEQNDLDKLLRACGMSEDGYDLETLQGVLQLKAENNADTYTHGWCIYT CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCEEEEE SEMYQVDLKPIHKAISAEGIETGDDLYHPLFILVCERVSEEGVDPVDAVKAEMRGVEEVP CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LVESAIPRAELPEVLKRKIDPIIDLATENTIHQVVQVLGELDESANRYVNARIQAKADEI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRPEVAALVSKLTANQLTPGKQPLLKATVVEE HHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure TNATDLTQTLGIEQNDLDKLLRACGMSEDGYDLETLQGVLQLKAENNADTYTHGWCIYT CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCEEEEE SEMYQVDLKPIHKAISAEGIETGDDLYHPLFILVCERVSEEGVDPVDAVKAEMRGVEEVP CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LVESAIPRAELPEVLKRKIDPIIDLATENTIHQVVQVLGELDESANRYVNARIQAKADEI HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRPEVAALVSKLTANQLTPGKQPLLKATVVEE HHCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA