Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340436
Identifier: 158340436
GI number: 158340436
Start: 248349
End: 248471
Strand: Reverse
Name: 158340436
Synonym: AM1_C0364
Alternate gene names: NA
Gene position: 248471-248349 (Counterclockwise)
Preceding gene: 158340440
Following gene: 158340433
Centisome position: 90.97
GC content: 43.9
Gene sequence:
>123_bases ATGAGCCGTACGTTCCCCAAGATTTCCTCAAATTTGATTGATAGATTCTGGGAAGCATTCCTTAAGACCTTGTTGATGTC CATGAATACAGGGTCGCCCCTTGAATCTCCTGAAGAGCTTTGA
Upstream 100 bases:
>100_bases AAGATCAGCCAATATCCCAGGAGCCTGACGGTTCTAGGAGAGAGGCTGAGACTAGAATCCCTCTAGAGTGCGAGTCTTTA GAGGGATTCTGCTGCTAAGG
Downstream 100 bases:
>100_bases GGGGTTTCTTGCTGCTGGTGATGAGGTTTCGGAACCTTTCAGTCCTCTCATGGCAATCACATGAGCTTCTTAAGCTGACA AAAATGCCCTAAAACTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MSRTFPKISSNLIDRFWEAFLKTLLMSMNTGSPLESPEEL
Sequences:
>Translated_40_residues MSRTFPKISSNLIDRFWEAFLKTLLMSMNTGSPLESPEEL >Mature_39_residues SRTFPKISSNLIDRFWEAFLKTLLMSMNTGSPLESPEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4618; Mature: 4487
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTFPKISSNLIDRFWEAFLKTLLMSMNTGSPLESPEEL CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SRTFPKISSNLIDRFWEAFLKTLLMSMNTGSPLESPEEL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA