Click here to switch to the map view.

The map label for this gene is 158340434

Identifier: 158340434

GI number: 158340434

Start: 247635

End: 247958

Strand: Direct

Name: 158340434

Synonym: AM1_C0362

Alternate gene names: NA

Gene position: 247635-247958 (Clockwise)

Preceding gene: 158340432

Following gene: 158340435

Centisome position: 90.67

GC content: 40.74

Gene sequence:

>324_bases
ATGAGCTATGAAGTTTTTCAGCCTGCTGACCTGATGGACGGAATCAGTGCCAACCAATTACGCAGTGAGATTAACGATGC
CCTAGCTAATGGTGTGACAACGATTCTGATAGATCTTAGAGATGTCACCTTTATGAATAGTTCCGCCATTGGTTCCTTAG
TGGCTACGCTTAAATCAGTGCGAGGAGAAGATGGCACCCTCTCGTTATGCTCACTGAATGATCAGGTTCGTATTATCTTT
GAATTAACCAAAATGGACAATATTTTCGATATTTATGCAGATCGCCAAGAATTTATGCATAAAAATGGTATTTCCTCCAG
CTAA

Upstream 100 bases:

>100_bases
TCGGGAACTCTGTCTACACAATAACCGTGTGCTGATTGATGAGTCATCTCTACCCTCGCCTCACTCAACCTCAACAAAAC
TGAACCAGGAGGTTCAACAT

Downstream 100 bases:

>100_bases
CCTCATCCAGGCTCTTATGAATCAAAGCTTTGTTCTCGGAAAAGGTTTCAGCCACAATGCAGAGGGTGAACTGATCATCT
CTCCCCAGGTTGAGGCGTTT

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Sigma Factor Antagonist; STAS Domain-Containing Protein; Anti-Anti-Sigma Factor

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSYEVFQPADLMDGISANQLRSEINDALANGVTTILIDLRDVTFMNSSAIGSLVATLKSVRGEDGTLSLCSLNDQVRIIF
ELTKMDNIFDIYADRQEFMHKNGISSS

Sequences:

>Translated_107_residues
MSYEVFQPADLMDGISANQLRSEINDALANGVTTILIDLRDVTFMNSSAIGSLVATLKSVRGEDGTLSLCSLNDQVRIIF
ELTKMDNIFDIYADRQEFMHKNGISSS
>Mature_106_residues
SYEVFQPADLMDGISANQLRSEINDALANGVTTILIDLRDVTFMNSSAIGSLVATLKSVRGEDGTLSLCSLNDQVRIIFE
LTKMDNIFDIYADRQEFMHKNGISSS

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11810; Mature: 11678

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEVFQPADLMDGISANQLRSEINDALANGVTTILIDLRDVTFMNSSAIGSLVATLKSV
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEHHHHEECCCHHHHHHHHHHHHH
RGEDGTLSLCSLNDQVRIIFELTKMDNIFDIYADRQEFMHKNGISSS
CCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SYEVFQPADLMDGISANQLRSEINDALANGVTTILIDLRDVTFMNSSAIGSLVATLKSV
CCCCCCCHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEHHHHEECCCHHHHHHHHHHHHH
RGEDGTLSLCSLNDQVRIIFELTKMDNIFDIYADRQEFMHKNGISSS
CCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA