Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340431
Identifier: 158340431
GI number: 158340431
Start: 246364
End: 246801
Strand: Reverse
Name: 158340431
Synonym: AM1_C0359
Alternate gene names: NA
Gene position: 246801-246364 (Counterclockwise)
Preceding gene: 158340433
Following gene: 158340426
Centisome position: 90.36
GC content: 42.47
Gene sequence:
>438_bases ATGACTACCAATTTAAGCACCGAACCAACTTTTCCAATTAACTTTTCCCAAAGTACTCCCTACCTCGTTGTAGTTGATAC TGCCATTGATAATTACCAATATTTGCTAGCTAGCCCACTATTGGGTCGAGAGGTTCATATTCTCGATATTGAAACGGATG GGATTGCCCAAATCAAAACGCTCTTGAGTCAATTTGAAGGACTATCTTGTCTCCACCTGATTTGCAAAGGTGGACCTGAT CATCTTGAATTAGGAACAACTCGTTTAGATGTAGATAACCTTTGGGATTATGCAGATGAGATTTGCCAATGGCAGGACTA TTTGACAGAAGGTGCTGAAATATTCATCTACGGCTGTGAACTTGCCGCGAGTCGTCTTGGTCAGGCGTTTGTATCTTGGC TAGGTCTATTAATAGGTGCGACGGTTCGGACGGAATAG
Upstream 100 bases:
>100_bases ATTTCTCTGACTCAGCCCATTATGCTGAAAACTGTGAGAGGTAATTTTGAATCTGCCGAACTCATGTATCTGGGGGACAA TAAAACCTACCTTAGCCCCT
Downstream 100 bases:
>100_bases TGTGCAGAATTTGAGCGTCAAAGACTTAGCAAGAGAAATCTTCTCGCCAGAGCTGACGATCTCGATGATGGTTCCTGTAA TTGCTGTGATGATAGTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTTNLSTEPTFPINFSQSTPYLVVVDTAIDNYQYLLASPLLGREVHILDIETDGIAQIKTLLSQFEGLSCLHLICKGGPD HLELGTTRLDVDNLWDYADEICQWQDYLTEGAEIFIYGCELAASRLGQAFVSWLGLLIGATVRTE
Sequences:
>Translated_145_residues MTTNLSTEPTFPINFSQSTPYLVVVDTAIDNYQYLLASPLLGREVHILDIETDGIAQIKTLLSQFEGLSCLHLICKGGPD HLELGTTRLDVDNLWDYADEICQWQDYLTEGAEIFIYGCELAASRLGQAFVSWLGLLIGATVRTE >Mature_144_residues TTNLSTEPTFPINFSQSTPYLVVVDTAIDNYQYLLASPLLGREVHILDIETDGIAQIKTLLSQFEGLSCLHLICKGGPDH LELGTTRLDVDNLWDYADEICQWQDYLTEGAEIFIYGCELAASRLGQAFVSWLGLLIGATVRTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16115; Mature: 15984
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNLSTEPTFPINFSQSTPYLVVVDTAIDNYQYLLASPLLGREVHILDIETDGIAQIKT CCCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHH LLSQFEGLSCLHLICKGGPDHLELGTTRLDVDNLWDYADEICQWQDYLTEGAEIFIYGCE HHHHHCCCCEEHHHHCCCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH LAASRLGQAFVSWLGLLIGATVRTE HHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure TTNLSTEPTFPINFSQSTPYLVVVDTAIDNYQYLLASPLLGREVHILDIETDGIAQIKT CCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHH LLSQFEGLSCLHLICKGGPDHLELGTTRLDVDNLWDYADEICQWQDYLTEGAEIFIYGCE HHHHHCCCCEEHHHHCCCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH LAASRLGQAFVSWLGLLIGATVRTE HHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA