Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340430
Identifier: 158340430
GI number: 158340430
Start: 245525
End: 246007
Strand: Direct
Name: 158340430
Synonym: AM1_C0358
Alternate gene names: NA
Gene position: 245525-246007 (Clockwise)
Preceding gene: 158340429
Following gene: 158340432
Centisome position: 89.9
GC content: 45.55
Gene sequence:
>483_bases ATGGATCCGAATACTTTAGTCATCTGGAAAAACTTAGAGACTCGTCTAGATGTTCCCTTTAGGAATAATATGATGGCTCT CCTTTTGGAGATGGCACGAGAACGGACAGCCGATCCCCAAAAAATTGCCACCTGGATGTTGACCACGTCTGCTTGTATCT GCAATGCCGTGTTTGGCATCAATGATCCAGTGCCTCTGCTCTCTCTCTACATTCGAGTGTTATGTGATCACTATCCTCGA ACCATGGAACAAATTGCGCAGATATATTCTTACGGCAGCTTGAAGCGATATGTCCCTGTTATTGCAGATCGCGATGAGTT CATTGGTATCCTCAGTGCAGCAGGCTCAACCTTTGCGAATGGTGAACTGATACTGACGGATGGTGAAATCGATGTCAGCC AAAAAGGATTGGAGCGATTTCAATTGATCTGGAAAGCACCCGCCATGAAGCTTGAGAATCCTGGACCTTCAGTTTTATGG TGA
Upstream 100 bases:
>100_bases AGAGTTGCTATCCCGTTTACCTTACTGAGTATTGGTTTTAGAAGATTATTAGTCTATTTTGGGTATCCAAGGATAAAGCA AGTGAAAACCTCAAGCTCAA
Downstream 100 bases:
>100_bases TGTCTTAGTGATGGAAATAAAAGCTCCTCAAAATAGTCATTCTGGGGAGCTGTTCAAGTGAGGAGGTTCTCAAATACTGT TACAGAGAATCTCATTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDPNTLVIWKNLETRLDVPFRNNMMALLLEMARERTADPQKIATWMLTTSACICNAVFGINDPVPLLSLYIRVLCDHYPR TMEQIAQIYSYGSLKRYVPVIADRDEFIGILSAAGSTFANGELILTDGEIDVSQKGLERFQLIWKAPAMKLENPGPSVLW
Sequences:
>Translated_160_residues MDPNTLVIWKNLETRLDVPFRNNMMALLLEMARERTADPQKIATWMLTTSACICNAVFGINDPVPLLSLYIRVLCDHYPR TMEQIAQIYSYGSLKRYVPVIADRDEFIGILSAAGSTFANGELILTDGEIDVSQKGLERFQLIWKAPAMKLENPGPSVLW >Mature_160_residues MDPNTLVIWKNLETRLDVPFRNNMMALLLEMARERTADPQKIATWMLTTSACICNAVFGINDPVPLLSLYIRVLCDHYPR TMEQIAQIYSYGSLKRYVPVIADRDEFIGILSAAGSTFANGELILTDGEIDVSQKGLERFQLIWKAPAMKLENPGPSVLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18077; Mature: 18077
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPNTLVIWKNLETRLDVPFRNNMMALLLEMARERTADPQKIATWMLTTSACICNAVFGI CCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC NDPVPLLSLYIRVLCDHYPRTMEQIAQIYSYGSLKRYVPVIADRDEFIGILSAAGSTFAN CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCCEECCHHHHHHHHHCCCCCCC GELILTDGEIDVSQKGLERFQLIWKAPAMKLENPGPSVLW CEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC >Mature Secondary Structure MDPNTLVIWKNLETRLDVPFRNNMMALLLEMARERTADPQKIATWMLTTSACICNAVFGI CCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC NDPVPLLSLYIRVLCDHYPRTMEQIAQIYSYGSLKRYVPVIADRDEFIGILSAAGSTFAN CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCCEECCHHHHHHHHHCCCCCCC GELILTDGEIDVSQKGLERFQLIWKAPAMKLENPGPSVLW CEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA