Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340424
Identifier: 158340424
GI number: 158340424
Start: 242755
End: 243132
Strand: Direct
Name: 158340424
Synonym: AM1_C0352
Alternate gene names: NA
Gene position: 242755-243132 (Clockwise)
Preceding gene: 158340423
Following gene: 158340425
Centisome position: 88.88
GC content: 41.8
Gene sequence:
>378_bases ATGCCGAGAAAGAAAAAGCAAGCTAAACCCTTAACAGGAAAAGACTTAGTAGCCAAAGTAAAACAACTGAGTGATTACAC TCGTGAAGAAAAAGCGAAAGCTTGCGGATACGTTTCTAATGACAAAGGTGGCTCTGAACGAATTAAAACTATCGCATTCC TCAATGCTCTTTTAGATGCAGAAGGAATTGATTTAGATAGCCAATCTTCCAATGGGAGCGGCGTTGGAGGACGAAGAGCA AGCTATAAAGTTAGTGTGCAGACCAATGGCAATATTTTGGTGGGCCGTACTTATACCCAAGCACTAGAACTTGAGCCTGG GGATGAATTTGAAATCTCAGTAGGTCGCAAGCACATTCATTTGACCAAGGTTGCTTAA
Upstream 100 bases:
>100_bases ATCCTGACTAATTGGATCGGTTATCCGCTAGCCATAAACCTAAAACTATATGCAATCATTTAGTGGTCATAATGATACTG CTAGAGAGATTTTTTAACTC
Downstream 100 bases:
>100_bases GAGTTTATCCAGTCAATCAATAAACTCCCCTGTATAGTCTTGTACAGGGGAGTTTATTGATTGTGTAACCTCACTACATG GCAAACACAGAGGAGTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRA SYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA
Sequences:
>Translated_125_residues MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRA SYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA >Mature_124_residues PRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRAS YKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13550; Mature: 13418
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC EGIDLDSQSSNGSGVGGRRASYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIH CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECCEEEE LTKVA EEECC >Mature Secondary Structure PRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC EGIDLDSQSSNGSGVGGRRASYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIH CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECCEEEE LTKVA EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA