Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

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The map label for this gene is 158340424

Identifier: 158340424

GI number: 158340424

Start: 242755

End: 243132

Strand: Direct

Name: 158340424

Synonym: AM1_C0352

Alternate gene names: NA

Gene position: 242755-243132 (Clockwise)

Preceding gene: 158340423

Following gene: 158340425

Centisome position: 88.88

GC content: 41.8

Gene sequence:

>378_bases
ATGCCGAGAAAGAAAAAGCAAGCTAAACCCTTAACAGGAAAAGACTTAGTAGCCAAAGTAAAACAACTGAGTGATTACAC
TCGTGAAGAAAAAGCGAAAGCTTGCGGATACGTTTCTAATGACAAAGGTGGCTCTGAACGAATTAAAACTATCGCATTCC
TCAATGCTCTTTTAGATGCAGAAGGAATTGATTTAGATAGCCAATCTTCCAATGGGAGCGGCGTTGGAGGACGAAGAGCA
AGCTATAAAGTTAGTGTGCAGACCAATGGCAATATTTTGGTGGGCCGTACTTATACCCAAGCACTAGAACTTGAGCCTGG
GGATGAATTTGAAATCTCAGTAGGTCGCAAGCACATTCATTTGACCAAGGTTGCTTAA

Upstream 100 bases:

>100_bases
ATCCTGACTAATTGGATCGGTTATCCGCTAGCCATAAACCTAAAACTATATGCAATCATTTAGTGGTCATAATGATACTG
CTAGAGAGATTTTTTAACTC

Downstream 100 bases:

>100_bases
GAGTTTATCCAGTCAATCAATAAACTCCCCTGTATAGTCTTGTACAGGGGAGTTTATTGATTGTGTAACCTCACTACATG
GCAAACACAGAGGAGTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRA
SYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA

Sequences:

>Translated_125_residues
MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRA
SYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA
>Mature_124_residues
PRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDAEGIDLDSQSSNGSGVGGRRAS
YKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIHLTKVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13550; Mature: 13418

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
EGIDLDSQSSNGSGVGGRRASYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIH
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECCEEEE
LTKVA
EEECC
>Mature Secondary Structure 
PRKKKQAKPLTGKDLVAKVKQLSDYTREEKAKACGYVSNDKGGSERIKTIAFLNALLDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
EGIDLDSQSSNGSGVGGRRASYKVSVQTNGNILVGRTYTQALELEPGDEFEISVGRKHIH
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECCEEEE
LTKVA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA