Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340423
Identifier: 158340423
GI number: 158340423
Start: 242338
End: 242580
Strand: Direct
Name: 158340423
Synonym: AM1_C0351
Alternate gene names: NA
Gene position: 242338-242580 (Clockwise)
Preceding gene: 158340422
Following gene: 158340424
Centisome position: 88.73
GC content: 44.03
Gene sequence:
>243_bases ATGCCCAGCACTCCAGATCCCATCAGAGGTATTCTCCTAAAAGACAAACCAGAAGGCATATCTCAGTGTGGGATGTCTCA TGCAACTGTTGCCCAACATCTGTTCACAAATCAGTGGTATGAGCTATCTGCGAACGGGCAAGTCATTGGTTCGGCTCTGG ACTTAGACTTTTATAAACAGGATGCTACTCAAGGGCAAAATTCTGGGTCTACTGTCAAAACAAAGGAATTATCGAAGGTT TAA
Upstream 100 bases:
>100_bases GACATGGAGCTAGCTATGGATGTGCTGATGGGTAACCTGAAGATGCCTGAGTAGGGTTGCTAGCATGAGTCCAGATAATT GAACTGGGGAGATATTCCTA
Downstream 100 bases:
>100_bases AGCTAGGTTGCTAACATAATCACTCATTTTATTTCAATTAAAACTTCTTATGTAAAAATTCGATATCCAATGCCATCCTG ACTAATTGGATCGGTTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MPSTPDPIRGILLKDKPEGISQCGMSHATVAQHLFTNQWYELSANGQVIGSALDLDFYKQDATQGQNSGSTVKTKELSKV
Sequences:
>Translated_80_residues MPSTPDPIRGILLKDKPEGISQCGMSHATVAQHLFTNQWYELSANGQVIGSALDLDFYKQDATQGQNSGSTVKTKELSKV >Mature_79_residues PSTPDPIRGILLKDKPEGISQCGMSHATVAQHLFTNQWYELSANGQVIGSALDLDFYKQDATQGQNSGSTVKTKELSKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8680; Mature: 8549
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTPDPIRGILLKDKPEGISQCGMSHATVAQHLFTNQWYELSANGQVIGSALDLDFYKQ CCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHH DATQGQNSGSTVKTKELSKV CCCCCCCCCCEECCCCCCCC >Mature Secondary Structure PSTPDPIRGILLKDKPEGISQCGMSHATVAQHLFTNQWYELSANGQVIGSALDLDFYKQ CCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCHHHHH DATQGQNSGSTVKTKELSKV CCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA