Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340422

Identifier: 158340422

GI number: 158340422

Start: 241863

End: 242291

Strand: Direct

Name: 158340422

Synonym: AM1_C0350

Alternate gene names: NA

Gene position: 241863-242291 (Clockwise)

Preceding gene: 158340421

Following gene: 158340423

Centisome position: 88.56

GC content: 48.25

Gene sequence:

>429_bases
ATGACAAAGCAAGCTGAGTCCCCTCAATGGCAACCGATCAGGGTAATGCACGAATGTATTCCGATGGTCGATGGCATGTT
GGAGGAGGTGCAAAGCCAGCACAGCAATATGCTGGAAGCCCAGAAGAAACCTCATACGATGGATGATGCCACCATTCAAA
GGGTCATTGACGTTTACTCTGAGCAGCATGAATTCTTGTGGGTTTATAGGGAGCAGTTCTCTCGCTGGAAACAGGAAAGC
CCCACACCTCAACAGTTGAAGGATATCAACAGGCTTGAGCAGCAGGTGGATAAAATTGACCAAGCGCTCACGGGCATTCT
GAACATTGCAGATGACATCAAAGGTAAAACCATCGATAGCATCCTGGGTAAAAGCGACATGGAGCTAGCTATGGATGTGC
TGATGGGTAACCTGAAGATGCCTGAGTAG

Upstream 100 bases:

>100_bases
CAGGTTGCTTTACTAAAGAGGACAAAATTAACGACCCAAGCTGTTTGATGTAACGCAGGATCTGATAATTTGTCATCAAT
CCTCTGATTAAATCATCACC

Downstream 100 bases:

>100_bases
GGTTGCTAGCATGAGTCCAGATAATTGAACTGGGGAGATATTCCTAATGCCCAGCACTCCAGATCCCATCAGAGGTATTC
TCCTAAAAGACAAACCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQES
PTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE

Sequences:

>Translated_142_residues
MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQES
PTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE
>Mature_141_residues
TKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQESP
TPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16510; Mature: 16379

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EQHEFLWVYREQFSRWKQESPTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ILGKSDMELAMDVLMGNLKMPE
HHCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EQHEFLWVYREQFSRWKQESPTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ILGKSDMELAMDVLMGNLKMPE
HHCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA