Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340422
Identifier: 158340422
GI number: 158340422
Start: 241863
End: 242291
Strand: Direct
Name: 158340422
Synonym: AM1_C0350
Alternate gene names: NA
Gene position: 241863-242291 (Clockwise)
Preceding gene: 158340421
Following gene: 158340423
Centisome position: 88.56
GC content: 48.25
Gene sequence:
>429_bases ATGACAAAGCAAGCTGAGTCCCCTCAATGGCAACCGATCAGGGTAATGCACGAATGTATTCCGATGGTCGATGGCATGTT GGAGGAGGTGCAAAGCCAGCACAGCAATATGCTGGAAGCCCAGAAGAAACCTCATACGATGGATGATGCCACCATTCAAA GGGTCATTGACGTTTACTCTGAGCAGCATGAATTCTTGTGGGTTTATAGGGAGCAGTTCTCTCGCTGGAAACAGGAAAGC CCCACACCTCAACAGTTGAAGGATATCAACAGGCTTGAGCAGCAGGTGGATAAAATTGACCAAGCGCTCACGGGCATTCT GAACATTGCAGATGACATCAAAGGTAAAACCATCGATAGCATCCTGGGTAAAAGCGACATGGAGCTAGCTATGGATGTGC TGATGGGTAACCTGAAGATGCCTGAGTAG
Upstream 100 bases:
>100_bases CAGGTTGCTTTACTAAAGAGGACAAAATTAACGACCCAAGCTGTTTGATGTAACGCAGGATCTGATAATTTGTCATCAAT CCTCTGATTAAATCATCACC
Downstream 100 bases:
>100_bases GGTTGCTAGCATGAGTCCAGATAATTGAACTGGGGAGATATTCCTAATGCCCAGCACTCCAGATCCCATCAGAGGTATTC TCCTAAAAGACAAACCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQES PTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE
Sequences:
>Translated_142_residues MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQES PTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE >Mature_141_residues TKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYSEQHEFLWVYREQFSRWKQESP TPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDSILGKSDMELAMDVLMGNLKMPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16510; Mature: 16379
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EQHEFLWVYREQFSRWKQESPTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ILGKSDMELAMDVLMGNLKMPE HHCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TKQAESPQWQPIRVMHECIPMVDGMLEEVQSQHSNMLEAQKKPHTMDDATIQRVIDVYS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EQHEFLWVYREQFSRWKQESPTPQQLKDINRLEQQVDKIDQALTGILNIADDIKGKTIDS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ILGKSDMELAMDVLMGNLKMPE HHCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA