Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340419
Identifier: 158340419
GI number: 158340419
Start: 240108
End: 240599
Strand: Direct
Name: 158340419
Synonym: AM1_C0347
Alternate gene names: NA
Gene position: 240108-240599 (Clockwise)
Preceding gene: 158340418
Following gene: 158340420
Centisome position: 87.91
GC content: 44.51
Gene sequence:
>492_bases ATGGATCCAATTAACCTAGCCCTCTGGAAAAACTTAGAAACTCGTCTCAATACTCCTTTCAGGAAGAATATGGTCGATCT TGTTTTGGAGATGGCTCGTGACCGTACCACCGATCCGCATAAGATAGCGACTTGGATGGTGACTACTTCTACCTACATCT GTTATGCCATTTTCGGGACGAATAATCCCATGCCCTTGCTCTCACTCTATATCCGAGCACTAGATACTCAGTATCCAGCC ACCATGCAGAAAATATATGAAATATTATCCTATGAAGGTCTGGTGATATACGCTCCCTCGTCTCTTAAACGTGACGACTT TACGAGTATTCTCTGGGCAGCTGGTTCGACCTTTGCTAACGGCGAATTGAAACTGATAGAAGACAAGATCCATATCAACC CAAAGGGGTTACAGCGATTGAGATCGATTTGGCAAGCACCCACTAGGAAATGCAATAACCTTTCGGGCAACGCTGAGTAT ACAAGCCAATAG
Upstream 100 bases:
>100_bases TAGAGATTGACGAGATAGATGTTGCAGTCCTTGATGATCTACTGAAAGATCTACAACAAGATTGAGGCTTGCAAATATTA ATAGAAAAGATTAACCCTAT
Downstream 100 bases:
>100_bases TAAGGGTGGCGCATAGAGGCGAACAGCATAGACCTCTAAGATCAAATTAACCACCTCTCCACAAGCGGACGAGGTATCAA AGATCTTTCACTCCTAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MDPINLALWKNLETRLNTPFRKNMVDLVLEMARDRTTDPHKIATWMVTTSTYICYAIFGTNNPMPLLSLYIRALDTQYPA TMQKIYEILSYEGLVIYAPSSLKRDDFTSILWAAGSTFANGELKLIEDKIHINPKGLQRLRSIWQAPTRKCNNLSGNAEY TSQ
Sequences:
>Translated_163_residues MDPINLALWKNLETRLNTPFRKNMVDLVLEMARDRTTDPHKIATWMVTTSTYICYAIFGTNNPMPLLSLYIRALDTQYPA TMQKIYEILSYEGLVIYAPSSLKRDDFTSILWAAGSTFANGELKLIEDKIHINPKGLQRLRSIWQAPTRKCNNLSGNAEY TSQ >Mature_163_residues MDPINLALWKNLETRLNTPFRKNMVDLVLEMARDRTTDPHKIATWMVTTSTYICYAIFGTNNPMPLLSLYIRALDTQYPA TMQKIYEILSYEGLVIYAPSSLKRDDFTSILWAAGSTFANGELKLIEDKIHINPKGLQRLRSIWQAPTRKCNNLSGNAEY TSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18679; Mature: 18679
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPINLALWKNLETRLNTPFRKNMVDLVLEMARDRTTDPHKIATWMVTTSTYICYAIFGT CCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEEEECC NNPMPLLSLYIRALDTQYPATMQKIYEILSYEGLVIYAPSSLKRDDFTSILWAAGSTFAN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC GELKLIEDKIHINPKGLQRLRSIWQAPTRKCNNLSGNAEYTSQ CEEEEEECEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDPINLALWKNLETRLNTPFRKNMVDLVLEMARDRTTDPHKIATWMVTTSTYICYAIFGT CCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCEEEEEEECC NNPMPLLSLYIRALDTQYPATMQKIYEILSYEGLVIYAPSSLKRDDFTSILWAAGSTFAN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC GELKLIEDKIHINPKGLQRLRSIWQAPTRKCNNLSGNAEYTSQ CEEEEEECEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA