Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340409
Identifier: 158340409
GI number: 158340409
Start: 234115
End: 234504
Strand: Direct
Name: 158340409
Synonym: AM1_C0337
Alternate gene names: NA
Gene position: 234115-234504 (Clockwise)
Preceding gene: 158340407
Following gene: 158340410
Centisome position: 85.72
GC content: 42.82
Gene sequence:
>390_bases ATGCCGAAGAAAACTAAAAAACAAAGTAAGCCTTTAGCAGGTCAAGCGCTATTGACTAAAGTTAAAGCTCTAAACGATTT GACTCGGGAAGAAAAAGCCAAAGCTTGTGGTTACTACAAAATCGCTAAAAGTGGCACTGAACGCATTAATGTGATGGCCT TCCTGAATGCAGTCTTAGATGCAGAAGGAATGGACCTGGATGCACAAGTCAAGCGCAACAAGAAGATGGGAGGACGTCAA CCCAACTATCGCATCAGCGTACAATCTAACGGCAAGCTATTAGTCAGTAGTGCTTACACCAAGAAAATGGAGCTGCAACC GGGAGATGAGCTTGAAATTGCATTGGGGCGTAAGCATATTCATTTGAGACTCAAGACTGAAGAAGATTAA
Upstream 100 bases:
>100_bases AAATTATCTAAAAAATGACCCACCTCCAGAATTCGTCCTACACTCAATAGCAATTAATTTGCTTATCAAACTGGATGAAA GTAGACAGTGAGGTTTAAAG
Downstream 100 bases:
>100_bases TCATTGTGAAAAAAGACTCCCCTGTATTCTCTTCTACAGGGGAGTTGAAAAAGCTTTTATAACCTCAGAGGAGTTTATTC CCGACATCCGCCTATGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPKKTKKQSKPLAGQALLTKVKALNDLTREEKAKACGYYKIAKSGTERINVMAFLNAVLDAEGMDLDAQVKRNKKMGGRQ PNYRISVQSNGKLLVSSAYTKKMELQPGDELEIALGRKHIHLRLKTEED
Sequences:
>Translated_129_residues MPKKTKKQSKPLAGQALLTKVKALNDLTREEKAKACGYYKIAKSGTERINVMAFLNAVLDAEGMDLDAQVKRNKKMGGRQ PNYRISVQSNGKLLVSSAYTKKMELQPGDELEIALGRKHIHLRLKTEED >Mature_128_residues PKKTKKQSKPLAGQALLTKVKALNDLTREEKAKACGYYKIAKSGTERINVMAFLNAVLDAEGMDLDAQVKRNKKMGGRQP NYRISVQSNGKLLVSSAYTKKMELQPGDELEIALGRKHIHLRLKTEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14428; Mature: 14297
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKTKKQSKPLAGQALLTKVKALNDLTREEKAKACGYYKIAKSGTERINVMAFLNAVLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHC AEGMDLDAQVKRNKKMGGRQPNYRISVQSNGKLLVSSAYTKKMELQPGDELEIALGRKHI CCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCEEEEECCEEE HLRLKTEED EEEEEECCC >Mature Secondary Structure PKKTKKQSKPLAGQALLTKVKALNDLTREEKAKACGYYKIAKSGTERINVMAFLNAVLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHC AEGMDLDAQVKRNKKMGGRQPNYRISVQSNGKLLVSSAYTKKMELQPGDELEIALGRKHI CCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCEEEEECCEEE HLRLKTEED EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA