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The map label for this gene is 158340405

Identifier: 158340405

GI number: 158340405

Start: 232980

End: 233321

Strand: Direct

Name: 158340405

Synonym: AM1_C0333

Alternate gene names: NA

Gene position: 232980-233321 (Clockwise)

Preceding gene: 158340404

Following gene: 158340407

Centisome position: 85.3

GC content: 40.64

Gene sequence:

>342_bases
ATGAAATTTCAAGACATTTTTGAGTACTTCAAAAACCCTCCTCCTACCAAACTGTGTCAAGAAGTAGCAGCATGCTTTAT
CTTGTCTGTACTAATCGATTTGGGTGACTCCGATTTTACAGCCATAAGCCAATATCTTAAGTCTAAGCATCCAGCTTATC
GGGTGTCAGATCACATTCTGTATATTGCCCGAAATTTCTTAGTTGATGAGGCTCTGATTCTATCTTATTGGCAAAAACAA
CCTGGTCAGGGCAGACCAAACCAAATGTATAAAATCTCAGTAGAGAAGCAAGGTGAAGCACTACAGCTAGCCCAACTCTG
GCATCGTTATCTGGGTGAGTAA

Upstream 100 bases:

>100_bases
AATCCATGGGTTCATGCTCAAGAAATGCTTACTCACGCTAATTGCTGCTGAATGTTTTGTCGGACTCGAAAATATCCTTC
ATCATCAGGAGGAAAAATTG

Downstream 100 bases:

>100_bases
AATTAAACGATTGCTTATTGCTTGGGCATCTGGCTCAATAAGAGTGAGAATATAAGTCCAAATGATATGCCTGGGGAGAT
ATCTAAGATGCCCAGCACCC

Product: circadian period extender, putative

Products: NA

Alternate protein names: Period-Extender Protein; PadR Family Transcriptional Regulator; Circadian Period Extender Pex; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Circadian Period Extender Gene; Transcriptional Regulator PadR Family Protein; Period-Extender; Transcriptional Regulator PadR Family; Circadian Period Extender

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKFQDIFEYFKNPPPTKLCQEVAACFILSVLIDLGDSDFTAISQYLKSKHPAYRVSDHILYIARNFLVDEALILSYWQKQ
PGQGRPNQMYKISVEKQGEALQLAQLWHRYLGE

Sequences:

>Translated_113_residues
MKFQDIFEYFKNPPPTKLCQEVAACFILSVLIDLGDSDFTAISQYLKSKHPAYRVSDHILYIARNFLVDEALILSYWQKQ
PGQGRPNQMYKISVEKQGEALQLAQLWHRYLGE
>Mature_113_residues
MKFQDIFEYFKNPPPTKLCQEVAACFILSVLIDLGDSDFTAISQYLKSKHPAYRVSDHILYIARNFLVDEALILSYWQKQ
PGQGRPNQMYKISVEKQGEALQLAQLWHRYLGE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13155; Mature: 13155

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQDIFEYFKNPPPTKLCQEVAACFILSVLIDLGDSDFTAISQYLKSKHPAYRVSDHIL
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
YIARNFLVDEALILSYWQKQPGQGRPNQMYKISVEKQGEALQLAQLWHRYLGE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFQDIFEYFKNPPPTKLCQEVAACFILSVLIDLGDSDFTAISQYLKSKHPAYRVSDHIL
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
YIARNFLVDEALILSYWQKQPGQGRPNQMYKISVEKQGEALQLAQLWHRYLGE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA