Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340404
Identifier: 158340404
GI number: 158340404
Start: 232233
End: 232811
Strand: Direct
Name: 158340404
Synonym: AM1_C0332
Alternate gene names: NA
Gene position: 232233-232811 (Clockwise)
Preceding gene: 158340403
Following gene: 158340405
Centisome position: 85.03
GC content: 41.11
Gene sequence:
>579_bases GTGGACGATTACGACCAACCAGAAAATAGCGATGATGATATCCCTATAAATGACAATGCCGGGGCACAACTTATCCAAAA GCTAAAAACTTATCTTGCTCCAGGGGCGTCACTCCTAGAGCTAGGAATGGGGTCAGGCAAAGACTTGAATCTATTGAGTC AATCTTATGTCGCCACAGGCTCTGATTACTCTCAAGACCTTCTCGATTGCTATCTCAGACGATTTCCTAAAGCTGATTTA ATCTTACTAAATGCACTCACATTACAGACTGTCAGAAAATTTGACTGCATTTATTCAAACAAAGTCCTTTATCAGTTGAC CCCTTTCGAACTGAAAAAGTCGTTGGTGCAACAACATCGAATCTTAAGCGATAAAGGAATACTCATGCACTCCTTTTGGT ATGGGAGCCACGTTGAAGACTTTCACGACACAATATGCACCTATTACACTGAACAAACCTTAAATGAAATCATTAGCAAA CGTTTTGAACTCTTGGAGATACAGAAGTACCAAGAGATAAGGAAAGGGGACTCTATTTATATCCTGCTTCGCAAATCAAC CCATGCGGTCCACCTCTGA
Upstream 100 bases:
>100_bases AGACTGCCATACTGAGGAAGAATTATGACTCCTAAAGATTTCTACAGACTTAAGCGATTGTTCAATACACCCCCTAAGAT GGGGCTTTGGGAGTATTGTT
Downstream 100 bases:
>100_bases ATCACTGTTACTCAGGTTTTATCTTTCATACCGCTCTTGTTCATCAATGCATAATACTTGCTACGCTCAATCCATGGGTT CATGCTCAAGAAATGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MDDYDQPENSDDDIPINDNAGAQLIQKLKTYLAPGASLLELGMGSGKDLNLLSQSYVATGSDYSQDLLDCYLRRFPKADL ILLNALTLQTVRKFDCIYSNKVLYQLTPFELKKSLVQQHRILSDKGILMHSFWYGSHVEDFHDTICTYYTEQTLNEIISK RFELLEIQKYQEIRKGDSIYILLRKSTHAVHL
Sequences:
>Translated_192_residues MDDYDQPENSDDDIPINDNAGAQLIQKLKTYLAPGASLLELGMGSGKDLNLLSQSYVATGSDYSQDLLDCYLRRFPKADL ILLNALTLQTVRKFDCIYSNKVLYQLTPFELKKSLVQQHRILSDKGILMHSFWYGSHVEDFHDTICTYYTEQTLNEIISK RFELLEIQKYQEIRKGDSIYILLRKSTHAVHL >Mature_192_residues MDDYDQPENSDDDIPINDNAGAQLIQKLKTYLAPGASLLELGMGSGKDLNLLSQSYVATGSDYSQDLLDCYLRRFPKADL ILLNALTLQTVRKFDCIYSNKVLYQLTPFELKKSLVQQHRILSDKGILMHSFWYGSHVEDFHDTICTYYTEQTLNEIISK RFELLEIQKYQEIRKGDSIYILLRKSTHAVHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22131; Mature: 22131
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYDQPENSDDDIPINDNAGAQLIQKLKTYLAPGASLLELGMGSGKDLNLLSQSYVATG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCC SDYSQDLLDCYLRRFPKADLILLNALTLQTVRKFDCIYSNKVLYQLTPFELKKSLVQQHR CCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH ILSDKGILMHSFWYGSHVEDFHDTICTYYTEQTLNEIISKRFELLEIQKYQEIRKGDSIY HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ILLRKSTHAVHL EEEECCCCCCCC >Mature Secondary Structure MDDYDQPENSDDDIPINDNAGAQLIQKLKTYLAPGASLLELGMGSGKDLNLLSQSYVATG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCC SDYSQDLLDCYLRRFPKADLILLNALTLQTVRKFDCIYSNKVLYQLTPFELKKSLVQQHR CCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH ILSDKGILMHSFWYGSHVEDFHDTICTYYTEQTLNEIISKRFELLEIQKYQEIRKGDSIY HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ILLRKSTHAVHL EEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA