Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340403
Identifier: 158340403
GI number: 158340403
Start: 231749
End: 232147
Strand: Direct
Name: 158340403
Synonym: AM1_C0331
Alternate gene names: NA
Gene position: 231749-232147 (Clockwise)
Preceding gene: 158340402
Following gene: 158340404
Centisome position: 84.85
GC content: 51.13
Gene sequence:
>399_bases ATGGGCACATGGGGACCAGGGAGCTTTGAGAATGATGATGCAATAGACTGGGTTGCAGAGCTAGAGAGCTACTCAGACGA TGGCCCTATCATTGATGCCCTCAACACCATCATTGACAGAGCCGATGATTACCCACAACCTCTAGATTGCTCCGTTGCCA TTGCGGCGGCAGAGTTAGTTGCTGCACAGTTAGGTAATTCCCATGAGGACTGCCCAGAGGAAATCGAGATATGGGTAGAG GGGCATCCAGCCCCCTCAGCAACGAGGATTGCCCAGGCTCGACAAGCCATCGAGGTAATTCTGGCTGAATCTGGACTCAA GGAAATGTGGCAAGATTCAGATGAATGGGAGAAATGGGAAGAAGCGATGGAGGATATGCTGTCTAGACTGCCATACTGA
Upstream 100 bases:
>100_bases TAATAAATATCGTAGACATATAAAGATTACACTCCCGCTTCCCTTGGCTTATCCTTTGTTCTCACGGTAAATTGTCCTTG AAGCTAACCAGAGTACTTCA
Downstream 100 bases:
>100_bases GGAAGAATTATGACTCCTAAAGATTTCTACAGACTTAAGCGATTGTTCAATACACCCCCTAAGATGGGGCTTTGGGAGTA TTGTTGTGGACGATTACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGTWGPGSFENDDAIDWVAELESYSDDGPIIDALNTIIDRADDYPQPLDCSVAIAAAELVAAQLGNSHEDCPEEIEIWVE GHPAPSATRIAQARQAIEVILAESGLKEMWQDSDEWEKWEEAMEDMLSRLPY
Sequences:
>Translated_132_residues MGTWGPGSFENDDAIDWVAELESYSDDGPIIDALNTIIDRADDYPQPLDCSVAIAAAELVAAQLGNSHEDCPEEIEIWVE GHPAPSATRIAQARQAIEVILAESGLKEMWQDSDEWEKWEEAMEDMLSRLPY >Mature_131_residues GTWGPGSFENDDAIDWVAELESYSDDGPIIDALNTIIDRADDYPQPLDCSVAIAAAELVAAQLGNSHEDCPEEIEIWVEG HPAPSATRIAQARQAIEVILAESGLKEMWQDSDEWEKWEEAMEDMLSRLPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14678; Mature: 14547
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTWGPGSFENDDAIDWVAELESYSDDGPIIDALNTIIDRADDYPQPLDCSVAIAAAELV CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AAQLGNSHEDCPEEIEIWVEGHPAPSATRIAQARQAIEVILAESGLKEMWQDSDEWEKWE HHHHCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EAMEDMLSRLPY HHHHHHHHHCCC >Mature Secondary Structure GTWGPGSFENDDAIDWVAELESYSDDGPIIDALNTIIDRADDYPQPLDCSVAIAAAELV CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AAQLGNSHEDCPEEIEIWVEGHPAPSATRIAQARQAIEVILAESGLKEMWQDSDEWEKWE HHHHCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH EAMEDMLSRLPY HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA