Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340372
Identifier: 158340372
GI number: 158340372
Start: 212688
End: 213173
Strand: Direct
Name: 158340372
Synonym: AM1_C0297
Alternate gene names: NA
Gene position: 212688-213173 (Clockwise)
Preceding gene: 158340371
Following gene: 158340377
Centisome position: 77.87
GC content: 43.83
Gene sequence:
>486_bases ATGGCACACTACAATTTCATTACAGTTTGGGACATTGATGCCCCTATTGAGGACGTTTGGGAGCAACTGATTCACTCTGA AGATTGGCCTCAATGGTGGCCTGCTGTCCAAAGTGTTATTGAATTGGAAAAAGGGGATGAACAGGGGATTGGCAATATCC GTGAATATCATTGGAAAACTCCTCTCTCCTATGCTTTAAGCTTTAAAACTCGTTTAGTTCGCATTGAACCGCCAATACTG ATTGAGGGAATTGCAAGCGGCGAAGTGGAGGGAAAAGGAATTTGGGAACTTCAATCCATACCTAAAGGCACTCGTGTCCA TTATTACTGGACTGTAGTGACAACCAAACTCTGGATGAATCTACTAGCATTGCTGCTTAAACCACTCATGGAGTGGAATC ACAATGCAACCATGAGACAAGGTGCCCAAGGTTTAAGCCAAAGGATGGATACAGAGGTAACTTGTCAGGAGATGGCTGAT TCCTAA
Upstream 100 bases:
>100_bases AGAGCCATTACCGGAGGGGACGAAAGAAGCGCGGCAGGTTCAATTAGTGTTGGGATTGTAATCAACACTTTAGTCATCCA AAGATGAGAATCTAAAAAAA
Downstream 100 bases:
>100_bases GCTTTGGAAGTAAAGATCATGCAAGCTTTGATGATGCCCTTCAGTCGCAGTTGCAATGCTGTGATTTAGAGGGAGCTAGG AAATATGCCTGGGACTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAHYNFITVWDIDAPIEDVWEQLIHSEDWPQWWPAVQSVIELEKGDEQGIGNIREYHWKTPLSYALSFKTRLVRIEPPIL IEGIASGEVEGKGIWELQSIPKGTRVHYYWTVVTTKLWMNLLALLLKPLMEWNHNATMRQGAQGLSQRMDTEVTCQEMAD S
Sequences:
>Translated_161_residues MAHYNFITVWDIDAPIEDVWEQLIHSEDWPQWWPAVQSVIELEKGDEQGIGNIREYHWKTPLSYALSFKTRLVRIEPPIL IEGIASGEVEGKGIWELQSIPKGTRVHYYWTVVTTKLWMNLLALLLKPLMEWNHNATMRQGAQGLSQRMDTEVTCQEMAD S >Mature_160_residues AHYNFITVWDIDAPIEDVWEQLIHSEDWPQWWPAVQSVIELEKGDEQGIGNIREYHWKTPLSYALSFKTRLVRIEPPILI EGIASGEVEGKGIWELQSIPKGTRVHYYWTVVTTKLWMNLLALLLKPLMEWNHNATMRQGAQGLSQRMDTEVTCQEMADS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18722; Mature: 18590
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHYNFITVWDIDAPIEDVWEQLIHSEDWPQWWPAVQSVIELEKGDEQGIGNIREYHWKT CCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC PLSYALSFKTRLVRIEPPILIEGIASGEVEGKGIWELQSIPKGTRVHYYWTVVTTKLWMN CHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHH LLALLLKPLMEWNHNATMRQGAQGLSQRMDTEVTCQEMADS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure AHYNFITVWDIDAPIEDVWEQLIHSEDWPQWWPAVQSVIELEKGDEQGIGNIREYHWKT CCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC PLSYALSFKTRLVRIEPPILIEGIASGEVEGKGIWELQSIPKGTRVHYYWTVVTTKLWMN CHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHH LLALLLKPLMEWNHNATMRQGAQGLSQRMDTEVTCQEMADS HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA