Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340369
Identifier: 158340369
GI number: 158340369
Start: 210412
End: 210900
Strand: Reverse
Name: 158340369
Synonym: AM1_C0294
Alternate gene names: NA
Gene position: 210900-210412 (Counterclockwise)
Preceding gene: 158340370
Following gene: 158340368
Centisome position: 77.22
GC content: 41.1
Gene sequence:
>489_bases ATGATCAGCAAAGAAGTCATTGCAGCCCATAAGCTTAGCCCCGTGGTTGAGACCATTTTTCATTGGCAAGCTGATGATCC GAGTCATTGTTTACTCAGGATTTATTCTGATGACCAAACCCAGAAAGCTTATGTGGTGGCATCAGAACTTTATAGCAACA ACGAAATGGGAAAACATGTTTCTAGGCACTTTGAAGAGTTAGCCCTAGCGGTTGCAAACCAATATCCTGAATTACTTGAC CCAACTAAAATTACCGATGTTACTTGGATCTGTCACTATGGAATGTTCTCAGTGGCTGACTCGTTTGAGAATATCGGTAC TCCAGACCGATTGACAAAGATTTATCTCGTTTGGCCTCTATCTTCAACTTTCAATGTGTGGGAGCGTAAAGAAGTTGTGC TGAGTGAATCTGAACAAGAGGAACTGTTTTCTAGAGTTTCATTCACCTCAGTGTCAGAAATTTTAGATAGGTTAGCAGGT GGTCAATAA
Upstream 100 bases:
>100_bases GGAGGAATAAGGGCAGATTGGGCTGATTGGATGCCCCAGGCGATTCAGAAGTACCAACAGAAATCTCAGACTCCATTACC AGCATTCGCGAGGTAGCGAC
Downstream 100 bases:
>100_bases AGTTACTGGGGGGCCAGTATTAAAAAAGGTAAAAACTATACTAGCTCCATTTTCAGGTGATTTTTCGAATCAGCGTGTAA CAATTATCCGCTTAAGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG GQ
Sequences:
>Translated_162_residues MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG GQ >Mature_162_residues MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG GQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18513; Mature: 18513
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH SRHFEELALAVANQYPELLDPTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPL HHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEC SSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAGGQ CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH SRHFEELALAVANQYPELLDPTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPL HHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEC SSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAGGQ CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA