Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340369

Identifier: 158340369

GI number: 158340369

Start: 210412

End: 210900

Strand: Reverse

Name: 158340369

Synonym: AM1_C0294

Alternate gene names: NA

Gene position: 210900-210412 (Counterclockwise)

Preceding gene: 158340370

Following gene: 158340368

Centisome position: 77.22

GC content: 41.1

Gene sequence:

>489_bases
ATGATCAGCAAAGAAGTCATTGCAGCCCATAAGCTTAGCCCCGTGGTTGAGACCATTTTTCATTGGCAAGCTGATGATCC
GAGTCATTGTTTACTCAGGATTTATTCTGATGACCAAACCCAGAAAGCTTATGTGGTGGCATCAGAACTTTATAGCAACA
ACGAAATGGGAAAACATGTTTCTAGGCACTTTGAAGAGTTAGCCCTAGCGGTTGCAAACCAATATCCTGAATTACTTGAC
CCAACTAAAATTACCGATGTTACTTGGATCTGTCACTATGGAATGTTCTCAGTGGCTGACTCGTTTGAGAATATCGGTAC
TCCAGACCGATTGACAAAGATTTATCTCGTTTGGCCTCTATCTTCAACTTTCAATGTGTGGGAGCGTAAAGAAGTTGTGC
TGAGTGAATCTGAACAAGAGGAACTGTTTTCTAGAGTTTCATTCACCTCAGTGTCAGAAATTTTAGATAGGTTAGCAGGT
GGTCAATAA

Upstream 100 bases:

>100_bases
GGAGGAATAAGGGCAGATTGGGCTGATTGGATGCCCCAGGCGATTCAGAAGTACCAACAGAAATCTCAGACTCCATTACC
AGCATTCGCGAGGTAGCGAC

Downstream 100 bases:

>100_bases
AGTTACTGGGGGGCCAGTATTAAAAAAGGTAAAAACTATACTAGCTCCATTTTCAGGTGATTTTTCGAATCAGCGTGTAA
CAATTATCCGCTTAAGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD
PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG
GQ

Sequences:

>Translated_162_residues
MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD
PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG
GQ
>Mature_162_residues
MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHVSRHFEELALAVANQYPELLD
PTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPLSSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAG
GQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18513; Mature: 18513

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
SRHFEELALAVANQYPELLDPTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPL
HHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEC
SSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAGGQ
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISKEVIAAHKLSPVVETIFHWQADDPSHCLLRIYSDDQTQKAYVVASELYSNNEMGKHV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHH
SRHFEELALAVANQYPELLDPTKITDVTWICHYGMFSVADSFENIGTPDRLTKIYLVWPL
HHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEC
SSTFNVWERKEVVLSESEQEELFSRVSFTSVSEILDRLAGGQ
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA