Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340367
Identifier: 158340367
GI number: 158340367
Start: 207929
End: 208588
Strand: Reverse
Name: 158340367
Synonym: AM1_C0292
Alternate gene names: NA
Gene position: 208588-207929 (Counterclockwise)
Preceding gene: 158340368
Following gene: 158340366
Centisome position: 76.37
GC content: 52.27
Gene sequence:
>660_bases ATGAAATTGATAACTTCTGTCAAAATCCAACAAGCTGACCACACCGAAGTCATCGACAGTGCTGCTACCCAAGTGGGCCT AGTTGCAAACAAAGCCTTCCTGTTCGTCATTCGCAAGGAAATCCAGGGCTGGAAAAACTTCACTGCTCTCTGCTCTTGGG GCCTGTTCAAAGTAAGCCAGAAGCATGGCCCCATCTTTGAGGAGGTAAAGGAACGAACTGTGGCGGTCTACCGCAAAGGT TGTCAGCAGGAGACGGCATTCGTCCAAGCGCTCATCAAAACTCAGCTCACGGATCGAATTGATGCCCATTGGAATCTCCA TGATCAGGCTCTCGATTGGTTCAAGGTCAAGACCCAGGCATTCCTGGCCGACAACCCGGTCGAGGATACTTCTGAGGTCG AGGCTGAGGATCTGACTCCTGATATTACGGAAGACCTGGAGGAGGCTGCACCCGTGGCTGAGGAGGAATCCATGACTATC TTGGATGAATCCTCGGTCCCGGTCCTTGATCCGCCTGTTGATCCTGACCCACTAGATGATGAGTTGGCCGTTCCTCAAGA CCCGACTCCTGTTGTGGCTAGTGGTAGTGGGAAACGTCGGACTGGAACCAAGAGGGTGACCCTAGCTGATGTGATGAAGC AAGAAGCTGCCAAATCCTAG
Upstream 100 bases:
>100_bases CAAAACAACCCCTTGCGTTTTCTCAATATCCACTTGGCCGACTCGGTGGCACATACCAGTCGCGCCCTATCCACTATTCG TTATTTAAAGGACAACACTC
Downstream 100 bases:
>100_bases GCAAGCAACTGGTGTACCTGGCCTCTGAGGGGACTTGGGGGCTGGGTGGTTCTGATAGGATGACAGTGGCTTAGGTTGGG TGGTGATTGAGCTAAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKLITSVKIQQADHTEVIDSAATQVGLVANKAFLFVIRKEIQGWKNFTALCSWGLFKVSQKHGPIFEEVKERTVAVYRKG CQQETAFVQALIKTQLTDRIDAHWNLHDQALDWFKVKTQAFLADNPVEDTSEVEAEDLTPDITEDLEEAAPVAEEESMTI LDESSVPVLDPPVDPDPLDDELAVPQDPTPVVASGSGKRRTGTKRVTLADVMKQEAAKS
Sequences:
>Translated_219_residues MKLITSVKIQQADHTEVIDSAATQVGLVANKAFLFVIRKEIQGWKNFTALCSWGLFKVSQKHGPIFEEVKERTVAVYRKG CQQETAFVQALIKTQLTDRIDAHWNLHDQALDWFKVKTQAFLADNPVEDTSEVEAEDLTPDITEDLEEAAPVAEEESMTI LDESSVPVLDPPVDPDPLDDELAVPQDPTPVVASGSGKRRTGTKRVTLADVMKQEAAKS >Mature_219_residues MKLITSVKIQQADHTEVIDSAATQVGLVANKAFLFVIRKEIQGWKNFTALCSWGLFKVSQKHGPIFEEVKERTVAVYRKG CQQETAFVQALIKTQLTDRIDAHWNLHDQALDWFKVKTQAFLADNPVEDTSEVEAEDLTPDITEDLEEAAPVAEEESMTI LDESSVPVLDPPVDPDPLDDELAVPQDPTPVVASGSGKRRTGTKRVTLADVMKQEAAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24257; Mature: 24257
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLITSVKIQQADHTEVIDSAATQVGLVANKAFLFVIRKEIQGWKNFTALCSWGLFKVSQ CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC KHGPIFEEVKERTVAVYRKGCQQETAFVQALIKTQLTDRIDAHWNLHDQALDWFKVKTQA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FLADNPVEDTSEVEAEDLTPDITEDLEEAAPVAEEESMTILDESSVPVLDPPVDPDPLDD HCCCCCCCCCHHCCHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC ELAVPQDPTPVVASGSGKRRTGTKRVTLADVMKQEAAKS CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKLITSVKIQQADHTEVIDSAATQVGLVANKAFLFVIRKEIQGWKNFTALCSWGLFKVSQ CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC KHGPIFEEVKERTVAVYRKGCQQETAFVQALIKTQLTDRIDAHWNLHDQALDWFKVKTQA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FLADNPVEDTSEVEAEDLTPDITEDLEEAAPVAEEESMTILDESSVPVLDPPVDPDPLDD HCCCCCCCCCHHCCHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC ELAVPQDPTPVVASGSGKRRTGTKRVTLADVMKQEAAKS CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA