Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340364
Identifier: 158340364
GI number: 158340364
Start: 206346
End: 206768
Strand: Reverse
Name: 158340364
Synonym: AM1_C0289
Alternate gene names: NA
Gene position: 206768-206346 (Counterclockwise)
Preceding gene: 158340366
Following gene: 158340360
Centisome position: 75.71
GC content: 39.72
Gene sequence:
>423_bases ATGATTTGTATCCCAACTCTTTCCCTCAAACAATTAGCGATTTTACGGCTTGCCAAAAAGTATCCTAGTAAGACAATTAA ACTGTATTGTGAGATGCCAATCATTAACCATGGTGAGCCTCCAACCGAATATGCAGCCGTTATTCAGAAGCTGATTGATT TGAATTTGATTGAAGTTAAGTCCAAACTGATGCGTCTTGATTTTTCGCGATTTCAAAAGAAATCATGGACTAAGTTCAGC ATAGATATAGAGCATCCCTCTATCCTCGCCTGGGAAATATGGCGAGATAAATACATTACTAGGCAAAAGGGAACGAATCG TGTCGCCATGCCTGGGGAAGAATTTGAAGATTTCAGCTATGTGTGGATTCAAGAAATAAGAGTTCAGGCTGTTCAACCGT GTGAAGACTCAATGCTCAAGTAA
Upstream 100 bases:
>100_bases ATGTAGTAAGCCATCCTTTAAATAAAGCAACAGGTTTTAGGGGAGCCTGGGGCTGAGTGGTTGGGTTGATGCTACTATTC TGCTAGCGCGGAGGAATCAA
Downstream 100 bases:
>100_bases TGCAACATCTCCAAGTAAAGGCAGGGAGCGGAGTAAAGGAATGGAACGGCTTTGTGATGGCGACATTACCGATCTGTGGA TATCCTCACTGGTATCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MICIPTLSLKQLAILRLAKKYPSKTIKLYCEMPIINHGEPPTEYAAVIQKLIDLNLIEVKSKLMRLDFSRFQKKSWTKFS IDIEHPSILAWEIWRDKYITRQKGTNRVAMPGEEFEDFSYVWIQEIRVQAVQPCEDSMLK
Sequences:
>Translated_140_residues MICIPTLSLKQLAILRLAKKYPSKTIKLYCEMPIINHGEPPTEYAAVIQKLIDLNLIEVKSKLMRLDFSRFQKKSWTKFS IDIEHPSILAWEIWRDKYITRQKGTNRVAMPGEEFEDFSYVWIQEIRVQAVQPCEDSMLK >Mature_140_residues MICIPTLSLKQLAILRLAKKYPSKTIKLYCEMPIINHGEPPTEYAAVIQKLIDLNLIEVKSKLMRLDFSRFQKKSWTKFS IDIEHPSILAWEIWRDKYITRQKGTNRVAMPGEEFEDFSYVWIQEIRVQAVQPCEDSMLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16505; Mature: 16505
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICIPTLSLKQLAILRLAKKYPSKTIKLYCEMPIINHGEPPTEYAAVIQKLIDLNLIEVK CEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHH SKLMRLDFSRFQKKSWTKFSIDIEHPSILAWEIWRDKYITRQKGTNRVAMPGEEFEDFSY HHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCCEECCCCCCCCCHHH VWIQEIRVQAVQPCEDSMLK HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MICIPTLSLKQLAILRLAKKYPSKTIKLYCEMPIINHGEPPTEYAAVIQKLIDLNLIEVK CEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHH SKLMRLDFSRFQKKSWTKFSIDIEHPSILAWEIWRDKYITRQKGTNRVAMPGEEFEDFSY HHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCCEECCCCCCCCCHHH VWIQEIRVQAVQPCEDSMLK HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA