Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340356
Identifier: 158340356
GI number: 158340356
Start: 201277
End: 202032
Strand: Direct
Name: 158340356
Synonym: AM1_C0281
Alternate gene names: NA
Gene position: 201277-202032 (Clockwise)
Preceding gene: 158340355
Following gene: 158340357
Centisome position: 73.7
GC content: 46.3
Gene sequence:
>756_bases ATGAAGAAGGTAGCAAAATCCTCTAAGAGTCTAAAATTTCTGATAACGGATATTGGTGTTATGAAGCTTAACTGGTTTAA ATTTCTACCCCTGTCAGCATGTCTATTACTCTGTATTTTTCCGCGAAACGCAATGGCTCTTGAATCTCATGATGAAGTGC AAGAATCAACTAAAGTGTTTACGGAAATCAATCGCGAACCTAAAACTCGGATCCCCTCAAGTCTCCTACAACGTAGTCAA GCGATCGCCATTCTTACCAATGTCACCCAAGGGGGATTCATCTTTGGAGTTCGACGGGGCGATGGCGTCATCCTCATTCG CAAGCCGAATGGTGGTTGGAGTAATCCAGCCTTTATTACGATTACGGGAGGTAGTTTTGGTCTACAAGCAGGTGCTAGAT CCAGTGATGTCATCCTGGTCTTTCCCAGTCAAACTGCGCTAAAGACTGTGCTTTCTGGGGCATTTGAATTTGGAGGGAGC GTCTCGGGAACTGCAGGACCTGTGGGAGAACAACCCGTTGAGTCTTTGGAAGGATTCAATGGGGATAAAGTCTATACCTA CTCCCGCAGTGAAGGGCTCTTTGGCGGGGTGACTCTGGAAGGCTCCGATCTAGATGATGATGACGGTCTGAACAAGGAAT TTTATGGGCAGCCTATTACTGCTACTCAAATTTTCCAGCGGTCCTCTATGCAGGCACCTGTAGTTGTTGACTCACTGAAA CAGGTTCTTCAACAAGCTGAAGCTGGGATTCGTTGA
Upstream 100 bases:
>100_bases TTCAGTCAGATGTGGAGCGCTAACTATATTCGCTGTGGCACCAGAACTATTCATCGGTGTGACGTGATGCCACTCACCCC ATCAATTGCTTTAAAAAACG
Downstream 100 bases:
>100_bases CCATCACTCAAGCTCAGTATTTAAGATATTGGGGGTTCGAGTCATGATGCCACTTCTCCGTAATCGTGCCGATGCTGGTC AACAGTTAGCAACTCAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKKVAKSSKSLKFLITDIGVMKLNWFKFLPLSACLLLCIFPRNAMALESHDEVQESTKVFTEINREPKTRIPSSLLQRSQ AIAILTNVTQGGFIFGVRRGDGVILIRKPNGGWSNPAFITITGGSFGLQAGARSSDVILVFPSQTALKTVLSGAFEFGGS VSGTAGPVGEQPVESLEGFNGDKVYTYSRSEGLFGGVTLEGSDLDDDDGLNKEFYGQPITATQIFQRSSMQAPVVVDSLK QVLQQAEAGIR
Sequences:
>Translated_251_residues MKKVAKSSKSLKFLITDIGVMKLNWFKFLPLSACLLLCIFPRNAMALESHDEVQESTKVFTEINREPKTRIPSSLLQRSQ AIAILTNVTQGGFIFGVRRGDGVILIRKPNGGWSNPAFITITGGSFGLQAGARSSDVILVFPSQTALKTVLSGAFEFGGS VSGTAGPVGEQPVESLEGFNGDKVYTYSRSEGLFGGVTLEGSDLDDDDGLNKEFYGQPITATQIFQRSSMQAPVVVDSLK QVLQQAEAGIR >Mature_251_residues MKKVAKSSKSLKFLITDIGVMKLNWFKFLPLSACLLLCIFPRNAMALESHDEVQESTKVFTEINREPKTRIPSSLLQRSQ AIAILTNVTQGGFIFGVRRGDGVILIRKPNGGWSNPAFITITGGSFGLQAGARSSDVILVFPSQTALKTVLSGAFEFGGS VSGTAGPVGEQPVESLEGFNGDKVYTYSRSEGLFGGVTLEGSDLDDDDGLNKEFYGQPITATQIFQRSSMQAPVVVDSLK QVLQQAEAGIR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=180, Percent_Identity=32.7777777777778, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI227430336, Length=180, Percent_Identity=32.7777777777778, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321804, Length=177, Percent_Identity=33.8983050847458, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321137, Length=177, Percent_Identity=35.5932203389831, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27029; Mature: 27029
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAKSSKSLKFLITDIGVMKLNWFKFLPLSACLLLCIFPRNAMALESHDEVQESTKVF CCCHHCCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHH TEINREPKTRIPSSLLQRSQAIAILTNVTQGGFIFGVRRGDGVILIRKPNGGWSNPAFIT HHHCCCCCCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEE ITGGSFGLQAGARSSDVILVFPSQTALKTVLSGAFEFGGSVSGTAGPVGEQPVESLEGFN EECCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCC GDKVYTYSRSEGLFGGVTLEGSDLDDDDGLNKEFYGQPITATQIFQRSSMQAPVVVDSLK CCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHH QVLQQAEAGIR HHHHHHHCCCC >Mature Secondary Structure MKKVAKSSKSLKFLITDIGVMKLNWFKFLPLSACLLLCIFPRNAMALESHDEVQESTKVF CCCHHCCCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHH TEINREPKTRIPSSLLQRSQAIAILTNVTQGGFIFGVRRGDGVILIRKPNGGWSNPAFIT HHHCCCCCCCCCHHHHHHHCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEE ITGGSFGLQAGARSSDVILVFPSQTALKTVLSGAFEFGGSVSGTAGPVGEQPVESLEGFN EECCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCC GDKVYTYSRSEGLFGGVTLEGSDLDDDDGLNKEFYGQPITATQIFQRSSMQAPVVVDSLK CCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHH QVLQQAEAGIR HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA