Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340350
Identifier: 158340350
GI number: 158340350
Start: 198974
End: 199558
Strand: Direct
Name: 158340350
Synonym: AM1_C0275
Alternate gene names: NA
Gene position: 198974-199558 (Clockwise)
Preceding gene: 158340349
Following gene: 158340351
Centisome position: 72.85
GC content: 46.15
Gene sequence:
>585_bases ATGAGTGAACCCCTACCCTCCTTAACCGTCAATCGCTCCTTCATGGAAGAATTCATTGAAGCGGAGAAACCCTGCTGTGG TTTGGGAATGGTGGAAGTTGAGGATCAACAATGTGGATTTGTGGCCCTACGACCGGAGCAGATGATTCCCCCAAGCGTGA CGGATCTGGGTTTCAATTTTGGACATACAATTTTCGGAACCAGCACCTATGAAGTGATTCACTTCGCCTTTGAATTCTAC GGTTTCAAAACCTTCAACATTCTCATCAACCCCAATAATGCAATTGCTCAGGCAGTTTTGGAACAGATGATTGAGAGTGG CGATTTTTTCTTCTTTGCTATTGATGAACAGACGGGGATTGCCACTGCCTTTCGCAGTGAGATTGATAATGACACCTTGC ATAGTCTGGTAGAAAACTGGGAGCGGATTCAGCACTCCAGCACGACGGAAGACCAATACTATCAGGTGATGCTGAAGTTT GCAGCGAACCCACACCCTCCAGGAATTCTCCTTAAATGGGTGTGCAAGACTAATGTCGAGTATTTGGATTTGAGCGAGGA TACGATGGATTTGACACCCGTATAG
Upstream 100 bases:
>100_bases AAGGGTGTAACTTCCGAGCAACCAGTCAGTTCCTCACCACAAGATCAGTAGTTGAGATGTATCAAAAAAAGGTTTCCTCT GATCAGCGTACAGGACAGCC
Downstream 100 bases:
>100_bases TTACTTGATTCTTAAATTATTGACAGGGGTTCATCCCCATTCGCTTATTAGGTAGAGAAAGAGAATACAAGCCATGGGTA AAACCAACGGTATACCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSEPLPSLTVNRSFMEEFIEAEKPCCGLGMVEVEDQQCGFVALRPEQMIPPSVTDLGFNFGHTIFGTSTYEVIHFAFEFY GFKTFNILINPNNAIAQAVLEQMIESGDFFFFAIDEQTGIATAFRSEIDNDTLHSLVENWERIQHSSTTEDQYYQVMLKF AANPHPPGILLKWVCKTNVEYLDLSEDTMDLTPV
Sequences:
>Translated_194_residues MSEPLPSLTVNRSFMEEFIEAEKPCCGLGMVEVEDQQCGFVALRPEQMIPPSVTDLGFNFGHTIFGTSTYEVIHFAFEFY GFKTFNILINPNNAIAQAVLEQMIESGDFFFFAIDEQTGIATAFRSEIDNDTLHSLVENWERIQHSSTTEDQYYQVMLKF AANPHPPGILLKWVCKTNVEYLDLSEDTMDLTPV >Mature_193_residues SEPLPSLTVNRSFMEEFIEAEKPCCGLGMVEVEDQQCGFVALRPEQMIPPSVTDLGFNFGHTIFGTSTYEVIHFAFEFYG FKTFNILINPNNAIAQAVLEQMIESGDFFFFAIDEQTGIATAFRSEIDNDTLHSLVENWERIQHSSTTEDQYYQVMLKFA ANPHPPGILLKWVCKTNVEYLDLSEDTMDLTPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22041; Mature: 21910
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLPSLTVNRSFMEEFIEAEKPCCGLGMVEVEDQQCGFVALRPEQMIPPSVTDLGFNF CCCCCCCCEECHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHCCCCC GHTIFGTSTYEVIHFAFEFYGFKTFNILINPNNAIAQAVLEQMIESGDFFFFAIDEQTGI CCEEECCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCH ATAFRSEIDNDTLHSLVENWERIQHSSTTEDQYYQVMLKFAANPHPPGILLKWVCKTNVE HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE YLDLSEDTMDLTPV EEECCCCCCCCCCC >Mature Secondary Structure SEPLPSLTVNRSFMEEFIEAEKPCCGLGMVEVEDQQCGFVALRPEQMIPPSVTDLGFNF CCCCCCCEECHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHCCCCC GHTIFGTSTYEVIHFAFEFYGFKTFNILINPNNAIAQAVLEQMIESGDFFFFAIDEQTGI CCEEECCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCH ATAFRSEIDNDTLHSLVENWERIQHSSTTEDQYYQVMLKFAANPHPPGILLKWVCKTNVE HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE YLDLSEDTMDLTPV EEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA