Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340349
Identifier: 158340349
GI number: 158340349
Start: 198125
End: 198622
Strand: Direct
Name: 158340349
Synonym: AM1_C0274
Alternate gene names: NA
Gene position: 198125-198622 (Clockwise)
Preceding gene: 158340348
Following gene: 158340350
Centisome position: 72.54
GC content: 40.36
Gene sequence:
>498_bases ATGGTGAAATATACCCTTAAAGAAGAACCTGAAACTGTCATTGAAATTCCAGGAAAAGACTCCAAGAAGACCCGCTCAAA AGCAATGGAGCAATTAGTGGAGATGATGGATAATGGACAACTGAAAACAACTCTTGACAGAGGATTTGGGCTGAATGATT TTATTGAGGTTCAAGAAAAATCTCATAATGAACCTTCAGCAGAGGAAGATGAGGTCGCTCAAGCAGTACAAGTATTGAAT CGTCTGGCATCCTTAAAGCTGAAACTGCAAGATACGCAACAAGATGCATTGGAAATTCGAGCAATTGTAGATTTGCTGTT TACTGATTCCCCTATCTCTGAGGAAGATGTGCATAGACTAAAACAAGGCTTTAAACTTCTCAAGAAATTTGCTCAAGCTA ACATTCAATATCGTGAAGCTCGTTCTCAAGCGGAGGCTGCTAGGGCTATTCTCGACCAGGCTTTGCAATCTGAATTACCT GCATCACAAGAATCTTAG
Upstream 100 bases:
>100_bases TTGCTGCAGCCTGAGTCATTACGATCAATCTTGATTCAAAAGATGTAATTATCTGGCCGTTTATCAGTACTATTGTATTA TTCACGATAGTTGAATCGTT
Downstream 100 bases:
>100_bases AAGAGCCGGGTCTAATTGTGGCCTGACGAAGAGTAGTAATGCTTTTCTAGAATATATCCGTAACGCCTTTCAGGATCACT CCTCAACTTAGACTTTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MVKYTLKEEPETVIEIPGKDSKKTRSKAMEQLVEMMDNGQLKTTLDRGFGLNDFIEVQEKSHNEPSAEEDEVAQAVQVLN RLASLKLKLQDTQQDALEIRAIVDLLFTDSPISEEDVHRLKQGFKLLKKFAQANIQYREARSQAEAARAILDQALQSELP ASQES
Sequences:
>Translated_165_residues MVKYTLKEEPETVIEIPGKDSKKTRSKAMEQLVEMMDNGQLKTTLDRGFGLNDFIEVQEKSHNEPSAEEDEVAQAVQVLN RLASLKLKLQDTQQDALEIRAIVDLLFTDSPISEEDVHRLKQGFKLLKKFAQANIQYREARSQAEAARAILDQALQSELP ASQES >Mature_165_residues MVKYTLKEEPETVIEIPGKDSKKTRSKAMEQLVEMMDNGQLKTTLDRGFGLNDFIEVQEKSHNEPSAEEDEVAQAVQVLN RLASLKLKLQDTQQDALEIRAIVDLLFTDSPISEEDVHRLKQGFKLLKKFAQANIQYREARSQAEAARAILDQALQSELP ASQES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18656; Mature: 18656
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKYTLKEEPETVIEIPGKDSKKTRSKAMEQLVEMMDNGQLKTTLDRGFGLNDFIEVQEK CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHH SHNEPSAEEDEVAQAVQVLNRLASLKLKLQDTQQDALEIRAIVDLLFTDSPISEEDVHRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KQGFKLLKKFAQANIQYREARSQAEAARAILDQALQSELPASQES HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVKYTLKEEPETVIEIPGKDSKKTRSKAMEQLVEMMDNGQLKTTLDRGFGLNDFIEVQEK CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCHHHHHHHHH SHNEPSAEEDEVAQAVQVLNRLASLKLKLQDTQQDALEIRAIVDLLFTDSPISEEDVHRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KQGFKLLKKFAQANIQYREARSQAEAARAILDQALQSELPASQES HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA