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The map label for this gene is rcaC [H]

Identifier: 158340334

GI number: 158340334

Start: 185373

End: 187394

Strand: Direct

Name: rcaC [H]

Synonym: AM1_C0259

Alternate gene names: 158340334

Gene position: 185373-187394 (Clockwise)

Preceding gene: 158340333

Following gene: 158340337

Centisome position: 67.87

GC content: 29.97

Gene sequence:

>2022_bases
ATGAAGATTTTACTAGTTGAAGATCAAGAAAATATTATTAACGAATTACTAAATATTTTTAGTCAATATAACTATATTGT
TGATGTTGTTAGAGATGGAGAATTAGGTTGGAAGTATAGTACAGCATTTGAATATGATTTGATAATTATTGATATCATAA
CCCCAAAAATTGATGGAATATCTCTATGCAAAAAACTTCGCACTGAAGGATATTTCACTCCTATTCTATTACTAACAGAA
CAAGGAAGTTTAACAGCAAAGATAAATGGACTAGATGCTGGTGCTGATGATTATTTAGTTCAACCATATCATCAAGCAGA
ATTAATATCTCGCATCCGAGCTTTGATAAGACGATGTAGTACTAGTCCTTTACCAATTTTGAGTTGGGAAAATTTATTAT
TGAATCAAAGTACCTGTGAGGTAAATTACGATGAACTACCTCTCAAATTAACAAATACTGAGTATGAATTGTTGGCATTA
TTGATGAGAGATAGTCAGCATGTATTCAGTTGTGAAGAATTAATTGATCGACTATGGTCTTCGGAAGATTTTCCATCTCC
AGCTACAGTTAGATCACATATTCGAAGATTACGCCAGAAACTATCAGAAGCTGGCGCTCCTAAAGATTTAATATCTACTG
TTCATGGGAGAGGTTATTACTTAAAACCTCTCATAGATAATATTAATAATAGAGATATACCTCATCGAAACAGTAAAGAG
AACAATAATGAAGTCATTATTGTTAATAAATCAGCTATTCTAGAGCCAGAGTCAGTTAATGCCAAAAATAAATACCCTAA
GTCAAGCTATGTATATCAAGAATATTTAAATTATTTAAATGAACTCTGGTCTAAAGAGAAACAGGGTTATATGAATTCTA
TAGAAAAGTTATCTCAATCTATTCTTAGCTTAAACTCTTTTAAAGATAAAGGTAAAAATACAACAAATATTCTAAATATC
TATCATCAATTAATTGGAGCCTTTGGTATATTTGGATTATCTTATGCAATGCGAATCCTGAATAACTGCAAAAACATAAT
TATAAGTGAATCTACTCCATTCAATGATTCTATATATTTGGAAATTCATGAATCACTAACTCAATTAAAGCAGCATCTTT
CCAATAATAAAATTATTGAAAATAATGCGAATTTTAATTCATATTTAAAACTATTTATAGTGACTAATAAAGCTATTAAT
CATGGTCAAAGGATTATTCAGCTGGGAATAGAACTTAGGGTAATTATTCATTTTATAATTTTATCTGACGAGGGCTGTGG
AAACGATATTACTTCTGGCGTTGATCAATCCAAACCTGAAATCAATATTTTATCTCCTGATGTAGTTTTGATATTATTAT
CAGATAAATTGGCTATTTCAAATAATGAAAATTTATCTATAATTGATAACAAAAACGTAATTGATATTTACAATTTTTTT
GTGAATTCCCATCCTTTTGTAGAGTTTTATATCTCAAGTGAATTCAAGGTAAGACAAATCTACAAGTTAAAAAAGCAAAA
GGATATATTTACCATTGTAGATACTAGTATATTTAGTCAACTTACGCCAGCGATCACCCAAATCGCTGAGTTACTTGATC
ATCTCAAAGAAGTTCATGTCATAATTATCGACTCTGATGAAGACTGGTTATGCTCAATTCCAAATGTTATTAAGCAAAAG
GGATATACAGCTACCACTCTTGCAGATGATTCTCAATTTTGGACAGTGTTAGAAGTAATTCATCCTGATGCATTAATTAT
TGAATATAAAAGCCCACAGATTGATAGCACTGAAATATGTAGGTTAATTCGTAATCATCCTTACTGGAACTACCTACCAA
TATTGTTACTTGTAGATGGTTTGAAAGTTGAAAATCAAAATCTTCTATACCAAGTAGGTGCCGATGATATTTTATTTAAA
CCTATCTCTAGTAATGAGTTAGCAAATAGAATTAGTCATAGACTAAAACGTATGCAGGATTATGCTGAACGTTTTAGATT
GTATGCAAACTATTTCAGTTAA

Upstream 100 bases:

>100_bases
TAAATATTTTGAACCACTAGTCATTCGTCTAATCAAATTGAGCCAGTTGTCAGTATTCTCAAAACTCCTTAATCTATGAG
CAACTAAGAACACCGAATAA

Downstream 100 bases:

>100_bases
ATGCATGTGGTACGTGACACTCATCCCTCTAACCCTGTGGGTGAGGAAACTCTTCTTTGAGCGATTCGACTTGCTAAACT
GAGCCGGAGTTTAAGGCAGT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MKILLVEDQENIINELLNIFSQYNYIVDVVRDGELGWKYSTAFEYDLIIIDIITPKIDGISLCKKLRTEGYFTPILLLTE
QGSLTAKINGLDAGADDYLVQPYHQAELISRIRALIRRCSTSPLPILSWENLLLNQSTCEVNYDELPLKLTNTEYELLAL
LMRDSQHVFSCEELIDRLWSSEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGRGYYLKPLIDNINNRDIPHRNSKE
NNNEVIIVNKSAILEPESVNAKNKYPKSSYVYQEYLNYLNELWSKEKQGYMNSIEKLSQSILSLNSFKDKGKNTTNILNI
YHQLIGAFGIFGLSYAMRILNNCKNIIISESTPFNDSIYLEIHESLTQLKQHLSNNKIIENNANFNSYLKLFIVTNKAIN
HGQRIIQLGIELRVIIHFIILSDEGCGNDITSGVDQSKPEINILSPDVVLILLSDKLAISNNENLSIIDNKNVIDIYNFF
VNSHPFVEFYISSEFKVRQIYKLKKQKDIFTIVDTSIFSQLTPAITQIAELLDHLKEVHVIIIDSDEDWLCSIPNVIKQK
GYTATTLADDSQFWTVLEVIHPDALIIEYKSPQIDSTEICRLIRNHPYWNYLPILLLVDGLKVENQNLLYQVGADDILFK
PISSNELANRISHRLKRMQDYAERFRLYANYFS

Sequences:

>Translated_673_residues
MKILLVEDQENIINELLNIFSQYNYIVDVVRDGELGWKYSTAFEYDLIIIDIITPKIDGISLCKKLRTEGYFTPILLLTE
QGSLTAKINGLDAGADDYLVQPYHQAELISRIRALIRRCSTSPLPILSWENLLLNQSTCEVNYDELPLKLTNTEYELLAL
LMRDSQHVFSCEELIDRLWSSEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGRGYYLKPLIDNINNRDIPHRNSKE
NNNEVIIVNKSAILEPESVNAKNKYPKSSYVYQEYLNYLNELWSKEKQGYMNSIEKLSQSILSLNSFKDKGKNTTNILNI
YHQLIGAFGIFGLSYAMRILNNCKNIIISESTPFNDSIYLEIHESLTQLKQHLSNNKIIENNANFNSYLKLFIVTNKAIN
HGQRIIQLGIELRVIIHFIILSDEGCGNDITSGVDQSKPEINILSPDVVLILLSDKLAISNNENLSIIDNKNVIDIYNFF
VNSHPFVEFYISSEFKVRQIYKLKKQKDIFTIVDTSIFSQLTPAITQIAELLDHLKEVHVIIIDSDEDWLCSIPNVIKQK
GYTATTLADDSQFWTVLEVIHPDALIIEYKSPQIDSTEICRLIRNHPYWNYLPILLLVDGLKVENQNLLYQVGADDILFK
PISSNELANRISHRLKRMQDYAERFRLYANYFS
>Mature_673_residues
MKILLVEDQENIINELLNIFSQYNYIVDVVRDGELGWKYSTAFEYDLIIIDIITPKIDGISLCKKLRTEGYFTPILLLTE
QGSLTAKINGLDAGADDYLVQPYHQAELISRIRALIRRCSTSPLPILSWENLLLNQSTCEVNYDELPLKLTNTEYELLAL
LMRDSQHVFSCEELIDRLWSSEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGRGYYLKPLIDNINNRDIPHRNSKE
NNNEVIIVNKSAILEPESVNAKNKYPKSSYVYQEYLNYLNELWSKEKQGYMNSIEKLSQSILSLNSFKDKGKNTTNILNI
YHQLIGAFGIFGLSYAMRILNNCKNIIISESTPFNDSIYLEIHESLTQLKQHLSNNKIIENNANFNSYLKLFIVTNKAIN
HGQRIIQLGIELRVIIHFIILSDEGCGNDITSGVDQSKPEINILSPDVVLILLSDKLAISNNENLSIIDNKNVIDIYNFF
VNSHPFVEFYISSEFKVRQIYKLKKQKDIFTIVDTSIFSQLTPAITQIAELLDHLKEVHVIIIDSDEDWLCSIPNVIKQK
GYTATTLADDSQFWTVLEVIHPDALIIEYKSPQIDSTEICRLIRNHPYWNYLPILLLVDGLKVENQNLLYQVGADDILFK
PISSNELANRISHRLKRMQDYAERFRLYANYFS

Specific function: Required for chromatic adaptation. Thought to be a positive regulator of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 response regulatory domains [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=31.8385650224215, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=34.3891402714932, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=36.6515837104072, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=32.579185520362, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=30.8035714285714, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=31.7180616740088, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=29.9107142857143, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=31.0810810810811, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=34.2105263157895, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=29.5652173913043, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.9473684210526, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR008207
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01627 Hpt; PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 77441; Mature: 77441

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVEDQENIINELLNIFSQYNYIVDVVRDGELGWKYSTAFEYDLIIIDIITPKIDGI
CEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECEEEEEEEEEEEECCCCCHH
SLCKKLRTEGYFTPILLLTEQGSLTAKINGLDAGADDYLVQPYHQAELISRIRALIRRCS
HHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCC
TSPLPILSWENLLLNQSTCEVNYDELPLKLTNTEYELLALLMRDSQHVFSCEELIDRLWS
CCCCCEEEHHHHHCCCCCCEECCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
SEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGRGYYLKPLIDNINNRDIPHRNSKE
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECHHHHCCCCCCCCCCCCCC
NNNEVIIVNKSAILEPESVNAKNKYPKSSYVYQEYLNYLNELWSKEKQGYMNSIEKLSQS
CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLNSFKDKGKNTTNILNIYHQLIGAFGIFGLSYAMRILNNCKNIIISESTPFNDSIYL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
EIHESLTQLKQHLSNNKIIENNANFNSYLKLFIVTNKAINHGQRIIQLGIELRVIIHFII
EEHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEE
LSDEGCGNDITSGVDQSKPEINILSPDVVLILLSDKLAISNNENLSIIDNKNVIDIYNFF
ECCCCCCCHHHCCCCCCCCCEEEECCCEEEEEEECCEEECCCCCEEEECCCCEEEHHHHH
VNSHPFVEFYISSEFKVRQIYKLKKQKDIFTIVDTSIFSQLTPAITQIAELLDHLKEVHV
CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEE
IIIDSDEDWLCSIPNVIKQKGYTATTLADDSQFWTVLEVIHPDALIIEYKSPQIDSTEIC
EEEECCCCCEECCCHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH
RLIRNHPYWNYLPILLLVDGLKVENQNLLYQVGADDILFKPISSNELANRISHRLKRMQD
HHHHCCCCCHHHHHHHHCCCCEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHH
YAERFRLYANYFS
HHHHHHHHHHHCC
>Mature Secondary Structure
MKILLVEDQENIINELLNIFSQYNYIVDVVRDGELGWKYSTAFEYDLIIIDIITPKIDGI
CEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECEEEEEEEEEEEECCCCCHH
SLCKKLRTEGYFTPILLLTEQGSLTAKINGLDAGADDYLVQPYHQAELISRIRALIRRCS
HHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCC
TSPLPILSWENLLLNQSTCEVNYDELPLKLTNTEYELLALLMRDSQHVFSCEELIDRLWS
CCCCCEEEHHHHHCCCCCCEECCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
SEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGRGYYLKPLIDNINNRDIPHRNSKE
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECHHHHCCCCCCCCCCCCCC
NNNEVIIVNKSAILEPESVNAKNKYPKSSYVYQEYLNYLNELWSKEKQGYMNSIEKLSQS
CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLNSFKDKGKNTTNILNIYHQLIGAFGIFGLSYAMRILNNCKNIIISESTPFNDSIYL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE
EIHESLTQLKQHLSNNKIIENNANFNSYLKLFIVTNKAINHGQRIIQLGIELRVIIHFII
EEHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEE
LSDEGCGNDITSGVDQSKPEINILSPDVVLILLSDKLAISNNENLSIIDNKNVIDIYNFF
ECCCCCCCHHHCCCCCCCCCEEEECCCEEEEEEECCEEECCCCCEEEECCCCEEEHHHHH
VNSHPFVEFYISSEFKVRQIYKLKKQKDIFTIVDTSIFSQLTPAITQIAELLDHLKEVHV
CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEE
IIIDSDEDWLCSIPNVIKQKGYTATTLADDSQFWTVLEVIHPDALIIEYKSPQIDSTEIC
EEEECCCCCEECCCHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH
RLIRNHPYWNYLPILLLVDGLKVENQNLLYQVGADDILFKPISSNELANRISHRLKRMQD
HHHHCCCCCHHHHHHHHCCCCEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHH
YAERFRLYANYFS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1409650 [H]