Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340330
Identifier: 158340330
GI number: 158340330
Start: 182979
End: 184082
Strand: Reverse
Name: 158340330
Synonym: AM1_C0255
Alternate gene names: NA
Gene position: 184082-182979 (Counterclockwise)
Preceding gene: 158340331
Following gene: 158340328
Centisome position: 67.4
GC content: 31.16
Gene sequence:
>1104_bases ATGGAATATAATCTTCTTGTAACAACTACATTCAATCCAAATAATTCTAATAGTCTACAAAATATTTTGGAGAATTCTAA AGATAAAATATATCCTAAAGATATTACTATAAATATTAAAAATATTTCAAAAACTTCATTTCCTGGCACGTATATTGGTG CAATTAACTTGACATATGGCAAACAAAACACAACTATTGAATGCATAAATAATACTGATAAACCCTTGATTCCTAAACTA TCAAGCCAAGAAACATGGAGTTATCTCTTATCTAATATCCAACAAGTTGATGAGTATCTACTCTTAAACCTAAGTTTATT TGGAATAAGCGATTCTAAAATCTATATGCATAAACTTTCTAATGCAGGAAAAATTGAAAAGATATTAGATCAATGCGAAT GGTCTAATATCTATTTCTCTAATGATTTTTCATCTAATGATATGAACAATAAATCTACAAATTTTGAAGGAGAATTAGAA AAAAGATGGACTTGGTCACTTGGGGTTAGTACCTTTAGTCTAATTATTTCATGTTTTGCGCTTCTATTTTCCTTAGGTAT TATCAACTTACCTCAGAAGCAGATGCAACCTATTAGGGCTGTTGCTCAAGAAAAGAATACCTCATCAGCTAGCACAAACA CTCTCCCTGGCCTTACTCTTCAAACTTCTAAAAATAATTCAAATGAAATTCCAAGCATAAAACCAAAGCAAGCATCTACC TATAAATCTAATCAAGTCCCAAGCATAAAACCAAAGCAAGCATCTACTTATAAACCTAATCAAGTCCCAAGTATCAAACC AAAGCAAGCATCTACCTATAAATCTAATCAAGTCCCAAGTATTAAACCAAAGCAAGCATCTACCTATAAATCTAATCAAG TCCCAAGCATAAAACCAAAGCAAGCATCTACCTATAAATCTAATCAAGTCCCAAGCATAAAACCAAAGCAAGCATCTACC TATAAACCTAGTCAAATTTCAAAAGAGGGGAAAATCAGCTTAGAAAATAGCAATTTAGCGGAATCTAGGTATGGTATTTT GTATAATTTTAGATCTGTAGCATGTAAAGCATACTTCAAGCATAAGCAGTATCTAAAAGCATAA
Upstream 100 bases:
>100_bases AGCTACCATAATCCAGGTTTTAAACTTAAATAGATCGTTATAAATTTCTAAAAGATAAATAGAAAAATTATTTATAAAAT GTTTCGAGGAAATTTTTTTG
Downstream 100 bases:
>100_bases AATTGGATTACTCCCTTCCGGCTATAAGATTATGGAACAAGTGAAAATATAAAATTCAGGTTGTTTTGAACTTGTTCAGC CGATAGAAACTGGTTAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MEYNLLVTTTFNPNNSNSLQNILENSKDKIYPKDITINIKNISKTSFPGTYIGAINLTYGKQNTTIECINNTDKPLIPKL SSQETWSYLLSNIQQVDEYLLLNLSLFGISDSKIYMHKLSNAGKIEKILDQCEWSNIYFSNDFSSNDMNNKSTNFEGELE KRWTWSLGVSTFSLIISCFALLFSLGIINLPQKQMQPIRAVAQEKNTSSASTNTLPGLTLQTSKNNSNEIPSIKPKQAST YKSNQVPSIKPKQASTYKPNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQAST YKPSQISKEGKISLENSNLAESRYGILYNFRSVACKAYFKHKQYLKA
Sequences:
>Translated_367_residues MEYNLLVTTTFNPNNSNSLQNILENSKDKIYPKDITINIKNISKTSFPGTYIGAINLTYGKQNTTIECINNTDKPLIPKL SSQETWSYLLSNIQQVDEYLLLNLSLFGISDSKIYMHKLSNAGKIEKILDQCEWSNIYFSNDFSSNDMNNKSTNFEGELE KRWTWSLGVSTFSLIISCFALLFSLGIINLPQKQMQPIRAVAQEKNTSSASTNTLPGLTLQTSKNNSNEIPSIKPKQAST YKSNQVPSIKPKQASTYKPNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQAST YKPSQISKEGKISLENSNLAESRYGILYNFRSVACKAYFKHKQYLKA >Mature_367_residues MEYNLLVTTTFNPNNSNSLQNILENSKDKIYPKDITINIKNISKTSFPGTYIGAINLTYGKQNTTIECINNTDKPLIPKL SSQETWSYLLSNIQQVDEYLLLNLSLFGISDSKIYMHKLSNAGKIEKILDQCEWSNIYFSNDFSSNDMNNKSTNFEGELE KRWTWSLGVSTFSLIISCFALLFSLGIINLPQKQMQPIRAVAQEKNTSSASTNTLPGLTLQTSKNNSNEIPSIKPKQAST YKSNQVPSIKPKQASTYKPNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPKQAST YKPSQISKEGKISLENSNLAESRYGILYNFRSVACKAYFKHKQYLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41241; Mature: 41241
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNLLVTTTFNPNNSNSLQNILENSKDKIYPKDITINIKNISKTSFPGTYIGAINLTYG CCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEC KQNTTIECINNTDKPLIPKLSSQETWSYLLSNIQQVDEYLLLNLSLFGISDSKIYMHKLS CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCC NAGKIEKILDQCEWSNIYFSNDFSSNDMNNKSTNFEGELEKRWTWSLGVSTFSLIISCFA CCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH LLFSLGIINLPQKQMQPIRAVAQEKNTSSASTNTLPGLTLQTSKNNSNEIPSIKPKQAST HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC YKSNQVPSIKPKQASTYKPNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QASTYKSNQVPSIKPKQASTYKPSQISKEGKISLENSNLAESRYGILYNFRSVACKAYFK CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCCCCCHHHCCEEEEHHHHHHHHHHH HKQYLKA HHHHHCC >Mature Secondary Structure MEYNLLVTTTFNPNNSNSLQNILENSKDKIYPKDITINIKNISKTSFPGTYIGAINLTYG CCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEC KQNTTIECINNTDKPLIPKLSSQETWSYLLSNIQQVDEYLLLNLSLFGISDSKIYMHKLS CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCC NAGKIEKILDQCEWSNIYFSNDFSSNDMNNKSTNFEGELEKRWTWSLGVSTFSLIISCFA CCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH LLFSLGIINLPQKQMQPIRAVAQEKNTSSASTNTLPGLTLQTSKNNSNEIPSIKPKQAST HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC YKSNQVPSIKPKQASTYKPNQVPSIKPKQASTYKSNQVPSIKPKQASTYKSNQVPSIKPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QASTYKSNQVPSIKPKQASTYKPSQISKEGKISLENSNLAESRYGILYNFRSVACKAYFK CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEECCCCCCHHHCCEEEEHHHHHHHHHHH HKQYLKA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA