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The map label for this gene is hin [H]

Identifier: 158340327

GI number: 158340327

Start: 181265

End: 181690

Strand: Reverse

Name: hin [H]

Synonym: AM1_C0251

Alternate gene names: 158340327

Gene position: 181690-181265 (Counterclockwise)

Preceding gene: 158340328

Following gene: 158340326

Centisome position: 66.52

GC content: 51.17

Gene sequence:

>426_bases
ATGGCGAGGGTTGGCTATGCGCGGGTCAGTTCCGTAGGGCAGAGTCTGAATGTCCAGCTTGATAAGCTCAGGGACTGTGA
CAAAATCTTCCAGGAAAAGCGGAGTGGTGTTTCGTATCAACGACCTCGGCTTAAGGCTTGTCTGGAGTATGTGAGGGATG
GGGATACGCTGGTTGTTACTCGATTAGATCGACTGGCTCGCTCGACGCTTCACCTGTGCCAAGTGGCAGAGCAGTTAGAT
AGAAACAAGTGCATCTTCAGGTGCTTGACCAGAATATCGATACGACTGATGCGACGGGGCGATTGCTGTTTAATGTCCTC
GGAGCGATTGCCCAGTTCGAGACTGAAATCCGGGCTGAGCGTCAAATGGATGGGATTAAAAATGCCAGAGCCCGTGGAGT
CAGTTTTGGACGCAATAGTAAGTTGA

Upstream 100 bases:

>100_bases
ATACCATATCGCAAATTCAATTATGCAAGAGGTCTAATTAATGGTTCAAAATACCTTTCTCATATAGTTTAAAACATCGC
GATACATTGAGAGGCAGATC

Downstream 100 bases:

>100_bases
CGCCACAGCAATGTACTGAATTGCGGAATCGACGAGCGCAGGGAGAACTGATCAGGGTACTAATGGAAGATTACAATCTC
TCAAAAGCCAGTGTGTATAG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MARVGYARVSSVGQSLNVQLDKLRDCDKIFQEKRSGVSYQRPRLKACLEYVRDGDTLVVTRLDRLARSTLHLCQVAEQLD
RNKCIFRCLTRISIRLMRRGDCCLMSSERLPSSRLKSGLSVKWMGLKMPEPVESVLDAIVS

Sequences:

>Translated_141_residues
MARVGYARVSSVGQSLNVQLDKLRDCDKIFQEKRSGVSYQRPRLKACLEYVRDGDTLVVTRLDRLARSTLHLCQVAEQLD
RNKCIFRCLTRISIRLMRRGDCCLMSSERLPSSRLKSGLSVKWMGLKMPEPVESVLDAIVS
>Mature_140_residues
ARVGYARVSSVGQSLNVQLDKLRDCDKIFQEKRSGVSYQRPRLKACLEYVRDGDTLVVTRLDRLARSTLHLCQVAEQLDR
NKCIFRCLTRISIRLMRRGDCCLMSSERLPSSRLKSGLSVKWMGLKMPEPVESVLDAIVS

Specific function: A DNA fragment of approximately 900 base pairs, adjacent to the fljB (H2) gene, which specifies the synthesis of phase-2 flagellin, can exist in either orientation with respect to fljB. The orientation of the inversion region controls expression of fljB.

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=89, Percent_Identity=43.8202247191011, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 16077; Mature: 15946

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVGYARVSSVGQSLNVQLDKLRDCDKIFQEKRSGVSYQRPRLKACLEYVRDGDTLVVT
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
RLDRLARSTLHLCQVAEQLDRNKCIFRCLTRISIRLMRRGDCCLMSSERLPSSRLKSGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCC
VKWMGLKMPEPVESVLDAIVS
EEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ARVGYARVSSVGQSLNVQLDKLRDCDKIFQEKRSGVSYQRPRLKACLEYVRDGDTLVVT
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
RLDRLARSTLHLCQVAEQLDRNKCIFRCLTRISIRLMRRGDCCLMSSERLPSSRLKSGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCC
VKWMGLKMPEPVESVLDAIVS
EEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8423149 [H]