Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340322
Identifier: 158340322
GI number: 158340322
Start: 178795
End: 179199
Strand: Direct
Name: 158340322
Synonym: AM1_C0244
Alternate gene names: NA
Gene position: 178795-179199 (Clockwise)
Preceding gene: 158340319
Following gene: 158340323
Centisome position: 65.46
GC content: 51.6
Gene sequence:
>405_bases ATGGAATGCCCATACTGTCAAAGTGAGAAGATCCTTAAGCGTGGCTTTGATAGTCTGCAAGATGGGACATTAGTCCAGCG ATATCAGTGTAAGGATTGCAATCGTCGTTTCAACGAACGCACAGGCACCCCAATGGCTCGTTTACGCACCGCTAGTTCAG TGGTGAGCTATGCCATCAAAGCTCGCACCGAAGGAATGGGGGTCCGTTCAGCAGGTCGTACCTTTGGTAAATCTCATACC ACCATTATGCGTTGGGAAAAACGCCTAGCAGACCAAGCACAGAACTGGTCACCCCCCGCACCAGCAGCCTCTGATGTGAC GGTAGAAGGGGATGAAGTATACACTCGTGTAGGCAAAAATCTTCCCCCCCAGCCAGTCCAAGGGCTGGACCATCCACTTC CTTGA
Upstream 100 bases:
>100_bases AAAGGTAGTTTAGACATCTTGCAATATTCATTTGACGATGGGCACTGGTCTGTTAGCAGGATCTAGCTATAATGCCTTCG ACGGAACCTGATGTAGATCA
Downstream 100 bases:
>100_bases ACGCGAAAGCCGCTATTGGTTGACAGCACTAGCTGGCCTCAAGGATGCACAACTTTTTGCAAATGGCGTTTACTCAGCTT GGGAGTGGGTGAAAGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MECPYCQSEKILKRGFDSLQDGTLVQRYQCKDCNRRFNERTGTPMARLRTASSVVSYAIKARTEGMGVRSAGRTFGKSHT TIMRWEKRLADQAQNWSPPAPAASDVTVEGDEVYTRVGKNLPPQPVQGLDHPLP
Sequences:
>Translated_134_residues MECPYCQSEKILKRGFDSLQDGTLVQRYQCKDCNRRFNERTGTPMARLRTASSVVSYAIKARTEGMGVRSAGRTFGKSHT TIMRWEKRLADQAQNWSPPAPAASDVTVEGDEVYTRVGKNLPPQPVQGLDHPLP >Mature_134_residues MECPYCQSEKILKRGFDSLQDGTLVQRYQCKDCNRRFNERTGTPMARLRTASSVVSYAIKARTEGMGVRSAGRTFGKSHT TIMRWEKRLADQAQNWSPPAPAASDVTVEGDEVYTRVGKNLPPQPVQGLDHPLP
Specific function: Unknown
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14999; Mature: 14999
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECPYCQSEKILKRGFDSLQDGTLVQRYQCKDCNRRFNERTGTPMARLRTASSVVSYAIK CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ARTEGMGVRSAGRTFGKSHTTIMRWEKRLADQAQNWSPPAPAASDVTVEGDEVYTRVGKN HHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCC LPPQPVQGLDHPLP CCCCCCCCCCCCCC >Mature Secondary Structure MECPYCQSEKILKRGFDSLQDGTLVQRYQCKDCNRRFNERTGTPMARLRTASSVVSYAIK CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ARTEGMGVRSAGRTFGKSHTTIMRWEKRLADQAQNWSPPAPAASDVTVEGDEVYTRVGKN HHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCC LPPQPVQGLDHPLP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA