Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340318
Identifier: 158340318
GI number: 158340318
Start: 176366
End: 177295
Strand: Direct
Name: 158340318
Synonym: AM1_C0240
Alternate gene names: NA
Gene position: 176366-177295 (Clockwise)
Preceding gene: 158340317
Following gene: 158340319
Centisome position: 64.57
GC content: 45.81
Gene sequence:
>930_bases ATGGCCCAGTTAACGGTTAGTGAGGTTCTTTCAAAGGCTCAGAATCAGCAATCTTTGCACTGTACTGAACTTAGTCATAT CAATTTAACGGGAGCGCTACTAAGGGGATGCAATTTTTCGCAGGCTTATTTAAGAGGCGCTAACTTAGCCAAATCAATTT GTGATGAGGCTGATTTTTCATTAGCGACCCTTGTCCTGGCTATTTTGTCAGGTGCTTCACTTGAACGGGCTTGTCTTAGA AAAGCAGAATTGACCAAAGCAAAGCTTGATCGGGGAGTCTTTCATGAACTAAATGCCCCTCAAGCAAAATTTCATGGTGC AGATTTACATGAAGCCGATCTATCATTTGCCACGCTCTTGAACGCAGATTTATCAGCAGCCATAGGGCCGGGGGCAAATT TCAAAAATAGTAACCTGCAAGAGTCAACCTTAAGTAATGGTAATTTCAATGGTGCCAGTTTTAGGGGGGCTAAGGTGGTC CGCAGTGTGGGTCAGCGTTCTACGTTGAACGAAGCGGTTTTTCTCTTGGCTGATCTGGAAGCGGCTGAGTTTGAAGAGGT TCAAGCTCCAGAAGCTGACTTTACCAAAGCAGAATTAATCAATGCCAATTTCCAGCAATCCAATTTAAGTCATGCTGTTC TGCGTCAAGTGCAAGGAGATTGGGGCAAGTTCAATGGTGCTTCCTTGAATTGTACAGATTGGCAAGACTCGATGCTCTTT GGAGCCCAATTTGAGGGTTCAGACCTTACAGGAGCTAACTTCACTGGGGTGAATCTGCAGCAGGCCAACTTGGAGAGGGC AAACTTGTCTGATGTGAACTGGAGCAATGCGCAAGTCAGCGGTGCCCTCATGACGGATGTCCAAGGTTTAACACCACAAG AAGGCCGAGAGCTCAATGAGAGAGGAGCTCTAAATGTCTCCCAAGCATAA
Upstream 100 bases:
>100_bases GAATCTTCATTGTGCAGAACTGTATAATTCGATACAGTATTAGTAAGATTCAAACCAGCCCGATAAGACCGTTATCGACT TTAGATAAACCAAACTTAAG
Downstream 100 bases:
>100_bases AACAGCAATTGGATCATGAATGCTCAGACAGATTGTGATAAAAAAGCCCTCCGCTGTTCCAAAGACCTGCAGAAGTTTTG GGAAAAGTACCATGCTTCTG
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MAQLTVSEVLSKAQNQQSLHCTELSHINLTGALLRGCNFSQAYLRGANLAKSICDEADFSLATLVLAILSGASLERACLR KAELTKAKLDRGVFHELNAPQAKFHGADLHEADLSFATLLNADLSAAIGPGANFKNSNLQESTLSNGNFNGASFRGAKVV RSVGQRSTLNEAVFLLADLEAAEFEEVQAPEADFTKAELINANFQQSNLSHAVLRQVQGDWGKFNGASLNCTDWQDSMLF GAQFEGSDLTGANFTGVNLQQANLERANLSDVNWSNAQVSGALMTDVQGLTPQEGRELNERGALNVSQA
Sequences:
>Translated_309_residues MAQLTVSEVLSKAQNQQSLHCTELSHINLTGALLRGCNFSQAYLRGANLAKSICDEADFSLATLVLAILSGASLERACLR KAELTKAKLDRGVFHELNAPQAKFHGADLHEADLSFATLLNADLSAAIGPGANFKNSNLQESTLSNGNFNGASFRGAKVV RSVGQRSTLNEAVFLLADLEAAEFEEVQAPEADFTKAELINANFQQSNLSHAVLRQVQGDWGKFNGASLNCTDWQDSMLF GAQFEGSDLTGANFTGVNLQQANLERANLSDVNWSNAQVSGALMTDVQGLTPQEGRELNERGALNVSQA >Mature_308_residues AQLTVSEVLSKAQNQQSLHCTELSHINLTGALLRGCNFSQAYLRGANLAKSICDEADFSLATLVLAILSGASLERACLRK AELTKAKLDRGVFHELNAPQAKFHGADLHEADLSFATLLNADLSAAIGPGANFKNSNLQESTLSNGNFNGASFRGAKVVR SVGQRSTLNEAVFLLADLEAAEFEEVQAPEADFTKAELINANFQQSNLSHAVLRQVQGDWGKFNGASLNCTDWQDSMLFG AQFEGSDLTGANFTGVNLQQANLERANLSDVNWSNAQVSGALMTDVQGLTPQEGRELNERGALNVSQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 33104; Mature: 32973
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLTVSEVLSKAQNQQSLHCTELSHINLTGALLRGCNFSQAYLRGANLAKSICDEADFS CCCCCHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH LATLVLAILSGASLERACLRKAELTKAKLDRGVFHELNAPQAKFHGADLHEADLSFATLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHH NADLSAAIGPGANFKNSNLQESTLSNGNFNGASFRGAKVVRSVGQRSTLNEAVFLLADLE CCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC AAEFEEVQAPEADFTKAELINANFQQSNLSHAVLRQVQGDWGKFNGASLNCTDWQDSMLF HHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEE GAQFEGSDLTGANFTGVNLQQANLERANLSDVNWSNAQVSGALMTDVQGLTPQEGRELNE CCEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCHHHHHCCCCCCHHCCCHHH RGALNVSQA CCCCCCCCC >Mature Secondary Structure AQLTVSEVLSKAQNQQSLHCTELSHINLTGALLRGCNFSQAYLRGANLAKSICDEADFS CCCCHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH LATLVLAILSGASLERACLRKAELTKAKLDRGVFHELNAPQAKFHGADLHEADLSFATLL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHH NADLSAAIGPGANFKNSNLQESTLSNGNFNGASFRGAKVVRSVGQRSTLNEAVFLLADLE CCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC AAEFEEVQAPEADFTKAELINANFQQSNLSHAVLRQVQGDWGKFNGASLNCTDWQDSMLF HHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEE GAQFEGSDLTGANFTGVNLQQANLERANLSDVNWSNAQVSGALMTDVQGLTPQEGRELNE CCEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCHHHHHCCCCCCHHCCCHHH RGALNVSQA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]