Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340316
Identifier: 158340316
GI number: 158340316
Start: 175080
End: 175490
Strand: Direct
Name: 158340316
Synonym: AM1_C0238
Alternate gene names: NA
Gene position: 175080-175490 (Clockwise)
Preceding gene: 158340313
Following gene: 158340317
Centisome position: 64.1
GC content: 48.66
Gene sequence:
>411_bases ATGACAACGGAATTGTTTTGGTTAACGCTAACGGTGACATTAACAGGTCTATTTTGGATGCCTTATGTGGCCAACCGGAT GCTAGAAATAGGAGTGATGGGGGCAATGAGAAATCCCACGACTGATGCGGCTCCGAAAGCAGCTTGGGCGGAGCGGATGA TCCATGCTCACTCAAATGCAGTGGAAAACTTAATGATTTTTGCGCCGTTGGTTGGCATCGCTGCGATCGCAAATATTTCC ACCCCTACGACTGTCGCTGCCTGCCAGCTTTACTTCTTTGCACGACTTGCCCACTATTTGATTTATACCTTCGGCATTCC TTTCCTCCGCACAGTTGCGTTTATTGCTGGCTTTGTCGCCCAGATGACTCTTGCAGCCGCTATTCTTGGCGCTGGCTTAC CTTTACAATAA
Upstream 100 bases:
>100_bases TAGCGATTTATTCTCTTGTTGATTTACTTTAATCTGCATATTAAGTTCTATCGCATTATGAACACCACCGTAATCATTCA TACCTAGGAGATGAATAGCA
Downstream 100 bases:
>100_bases CTACGTCGCCATGAATAATACTCAACCCTTTATGCTGGTGGCGGGTGCTGGTGCTGGGCTTGGTCAGTCACTTCTCCGCC GCTTCCAAGCAGGGGGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTTELFWLTLTVTLTGLFWMPYVANRMLEIGVMGAMRNPTTDAAPKAAWAERMIHAHSNAVENLMIFAPLVGIAAIANIS TPTTVAACQLYFFARLAHYLIYTFGIPFLRTVAFIAGFVAQMTLAAAILGAGLPLQ
Sequences:
>Translated_136_residues MTTELFWLTLTVTLTGLFWMPYVANRMLEIGVMGAMRNPTTDAAPKAAWAERMIHAHSNAVENLMIFAPLVGIAAIANIS TPTTVAACQLYFFARLAHYLIYTFGIPFLRTVAFIAGFVAQMTLAAAILGAGLPLQ >Mature_135_residues TTELFWLTLTVTLTGLFWMPYVANRMLEIGVMGAMRNPTTDAAPKAAWAERMIHAHSNAVENLMIFAPLVGIAAIANIST PTTVAACQLYFFARLAHYLIYTFGIPFLRTVAFIAGFVAQMTLAAAILGAGLPLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14781; Mature: 14650
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTELFWLTLTVTLTGLFWMPYVANRMLEIGVMGAMRNPTTDAAPKAAWAERMIHAHSNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VENLMIFAPLVGIAAIANISTPTTVAACQLYFFARLAHYLIYTFGIPFLRTVAFIAGFVA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMTLAAAILGAGLPLQ HHHHHHHHHHCCCCCC >Mature Secondary Structure TTELFWLTLTVTLTGLFWMPYVANRMLEIGVMGAMRNPTTDAAPKAAWAERMIHAHSNA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH VENLMIFAPLVGIAAIANISTPTTVAACQLYFFARLAHYLIYTFGIPFLRTVAFIAGFVA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMTLAAAILGAGLPLQ HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA