Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340306
Identifier: 158340306
GI number: 158340306
Start: 170079
End: 170324
Strand: Reverse
Name: 158340306
Synonym: AM1_C0227
Alternate gene names: NA
Gene position: 170324-170079 (Counterclockwise)
Preceding gene: 158340307
Following gene: 158340305
Centisome position: 62.36
GC content: 49.59
Gene sequence:
>246_bases ATGCATGACCAATTAACCTGGAATCAACTTGAAGATCTGAAATTTGCCTCCTCGAAAATGACAGGAGTCCGCCGCCGGGC TTTCCAGGCAGACATCGCCCTCAAATACTGTGACGGGAACCCCAATCTCACAGAAATTATCTTTGGCTGGGGTCGAAATA CGGTGGCAACAGGTTTAGGTGAGAAGCGAACAGGCATGATTTGTGTGGGTGCTCAGTCGGGTTTCTGTGGCAGGAAACGT TGGTAA
Upstream 100 bases:
>100_bases TCGTCTACATCGTGTATGACTCTTAGGCGATTTCTAGGAAAGACCTCACATACTTCTGACCACAGAATGTAATAGTGATG CATTGAATCTAACTCTGAGC
Downstream 100 bases:
>100_bases GACCTTCACCCAGAGGTCGCAGCCGCCTTACGGGAGCTTGCAGAAGCCCATTGCCAACAAGACCCCACCTTTTCCAGCTC AACTGCCTATACCCGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MHDQLTWNQLEDLKFASSKMTGVRRRAFQADIALKYCDGNPNLTEIIFGWGRNTVATGLGEKRTGMICVGAQSGFCGRKR W
Sequences:
>Translated_81_residues MHDQLTWNQLEDLKFASSKMTGVRRRAFQADIALKYCDGNPNLTEIIFGWGRNTVATGLGEKRTGMICVGAQSGFCGRKR W >Mature_81_residues MHDQLTWNQLEDLKFASSKMTGVRRRAFQADIALKYCDGNPNLTEIIFGWGRNTVATGLGEKRTGMICVGAQSGFCGRKR W
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9111; Mature: 9111
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDQLTWNQLEDLKFASSKMTGVRRRAFQADIALKYCDGNPNLTEIIFGWGRNTVATGLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCEECCCC EKRTGMICVGAQSGFCGRKRW CCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MHDQLTWNQLEDLKFASSKMTGVRRRAFQADIALKYCDGNPNLTEIIFGWGRNTVATGLG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCEECCCC EKRTGMICVGAQSGFCGRKRW CCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA