Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340302
Identifier: 158340302
GI number: 158340302
Start: 168077
End: 169111
Strand: Direct
Name: 158340302
Synonym: AM1_C0223
Alternate gene names: NA
Gene position: 168077-169111 (Clockwise)
Preceding gene: 158340298
Following gene: 158340308
Centisome position: 61.54
GC content: 46.76
Gene sequence:
>1035_bases ATGGAACTCCTCCAACAATTCCTCCCATGCCAAGACACCCTCCATTTGGATAGTTGGGATCTTGACTCCATAAACCTTCA GATAACATTCCACATTTCTTCAACTCAAGTTTTGGCTTGTTGTCCAGTCTGTCATCAGACCGCTCACCGGTTTCACAGTC GCTATGAGCGGACATTGAGAGACCTTCCCGGTGTGGATTTCTGCTTAACTATCCTGCTTCAGGTCTGTAAGTTTTTCTGC CTTAATGAGACCTGCAAATGTCGCATCTTTACTGAACGTATGCCTCAAGTGGCACTCCCTTGGGCTCGACGAACCGTCCG TTTTGCAGAACACCTGAGTAAGATCGGCCTAGCCCTCGGCGGTGAAGCCGCAGCTCGTTTAAGTTATCTGATTAATTATG AAAGTAGTCGTAATACGACGTTGCGGGCCGTATTCAAACTTTCCCTACCGCCAGTGACAACTCCCAAAATATTAGGGGTG GATGATTTTGCATTCCGTAGGGGCCAACAATATGGCACCATTCTGGTGGATCTCGAAAAGCACCAACCTCTTGTCCTATT GCCAGATCGCGAGGCCGGCACGCTAGCAGATTGGTTACGGGAACATCCAGGTGTCGAAATCGTTTCTCGTGATCGCTCGA AGACATACAAATCAGCCATAACCGCAGGTGCGCCTGATGCGATTCAGGTCGCTGATCGCTTTCACCTGCTACAAAATTTA GAAGCAGTGCTAGAAAAAGTGTTTAACTCCAGCTCACAGGCTATCAAGACCGCAGAGTACATGCTGCTGAAATCCAAAAT GACTGAGCATCAAGAAAAAGAGTCGAAATCGTTACCTATAGATCCGCCTGTTGATCCAAGTTCACGCAAAGCTCAAAATC GAGCTAGACGATTGGCCAAATATGAACAGACTCTTGCTTTACGGCAACAAGGATACAAGATCAAAGATATTGCCCATCAT CTGGGTATTGGGAAACGCACCGTTTATACCTATTTAGCGGCTGATACCTTTCCTGAATATAAGGTGATTTCCTGA
Upstream 100 bases:
>100_bases GACCATATTCGACCCAGTTTCACCTCGGGATCTAGTCCACTTTTGGTGATGCCAATTATGCGGTAGAGGATAGAGGGGTA AACCCTTTCCAGGTATGGTT
Downstream 100 bases:
>100_bases AAAGAAGCCCCGTACTAAATTGGATGGATTAGGATGTCCCACTTGGGTAACTGAGGATGTCTCTCCAATCGTTTCTCAAT GCCTTTCATTGCTTGTTTAG
Product: transposase
Products: NA
Alternate protein names: IS6 Family Transposase; ISL3 Family Transposase; LOW QUALITY PROTEIN Transposase; IS Transposase; ISL3 Family ISFsp1-Like Transposase; Transposase For Insertion Sequence Element; Transposase Subfamily; Transposase Of ISMdi2 ISL3 Family; Transposase Of
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MELLQQFLPCQDTLHLDSWDLDSINLQITFHISSTQVLACCPVCHQTAHRFHSRYERTLRDLPGVDFCLTILLQVCKFFC LNETCKCRIFTERMPQVALPWARRTVRFAEHLSKIGLALGGEAAARLSYLINYESSRNTTLRAVFKLSLPPVTTPKILGV DDFAFRRGQQYGTILVDLEKHQPLVLLPDREAGTLADWLREHPGVEIVSRDRSKTYKSAITAGAPDAIQVADRFHLLQNL EAVLEKVFNSSSQAIKTAEYMLLKSKMTEHQEKESKSLPIDPPVDPSSRKAQNRARRLAKYEQTLALRQQGYKIKDIAHH LGIGKRTVYTYLAADTFPEYKVIS
Sequences:
>Translated_344_residues MELLQQFLPCQDTLHLDSWDLDSINLQITFHISSTQVLACCPVCHQTAHRFHSRYERTLRDLPGVDFCLTILLQVCKFFC LNETCKCRIFTERMPQVALPWARRTVRFAEHLSKIGLALGGEAAARLSYLINYESSRNTTLRAVFKLSLPPVTTPKILGV DDFAFRRGQQYGTILVDLEKHQPLVLLPDREAGTLADWLREHPGVEIVSRDRSKTYKSAITAGAPDAIQVADRFHLLQNL EAVLEKVFNSSSQAIKTAEYMLLKSKMTEHQEKESKSLPIDPPVDPSSRKAQNRARRLAKYEQTLALRQQGYKIKDIAHH LGIGKRTVYTYLAADTFPEYKVIS >Mature_344_residues MELLQQFLPCQDTLHLDSWDLDSINLQITFHISSTQVLACCPVCHQTAHRFHSRYERTLRDLPGVDFCLTILLQVCKFFC LNETCKCRIFTERMPQVALPWARRTVRFAEHLSKIGLALGGEAAARLSYLINYESSRNTTLRAVFKLSLPPVTTPKILGV DDFAFRRGQQYGTILVDLEKHQPLVLLPDREAGTLADWLREHPGVEIVSRDRSKTYKSAITAGAPDAIQVADRFHLLQNL EAVLEKVFNSSSQAIKTAEYMLLKSKMTEHQEKESKSLPIDPPVDPSSRKAQNRARRLAKYEQTLALRQQGYKIKDIAHH LGIGKRTVYTYLAADTFPEYKVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39168; Mature: 39168
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLQQFLPCQDTLHLDSWDLDSINLQITFHISSTQVLACCPVCHQTAHRFHSRYERTLR CCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH DLPGVDFCLTILLQVCKFFCLNETCKCRIFTERMPQVALPWARRTVRFAEHLSKIGLALG HCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCHHCHHHHHHHHHHHHHHHHHHHCC GEAAARLSYLINYESSRNTTLRAVFKLSLPPVTTPKILGVDDFAFRRGQQYGTILVDLEK CHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCEEEEEECC HQPLVLLPDREAGTLADWLREHPGVEIVSRDRSKTYKSAITAGAPDAIQVADRFHLLQNL CCCEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EAVLEKVFNSSSQAIKTAEYMLLKSKMTEHQEKESKSLPIDPPVDPSSRKAQNRARRLAK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YEQTLALRQQGYKIKDIAHHLGIGKRTVYTYLAADTFPEYKVIS HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MELLQQFLPCQDTLHLDSWDLDSINLQITFHISSTQVLACCPVCHQTAHRFHSRYERTLR CCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH DLPGVDFCLTILLQVCKFFCLNETCKCRIFTERMPQVALPWARRTVRFAEHLSKIGLALG HCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCHHCHHHHHHHHHHHHHHHHHHHCC GEAAARLSYLINYESSRNTTLRAVFKLSLPPVTTPKILGVDDFAFRRGQQYGTILVDLEK CHHHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCEEEEEECC HQPLVLLPDREAGTLADWLREHPGVEIVSRDRSKTYKSAITAGAPDAIQVADRFHLLQNL CCCEEEECCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EAVLEKVFNSSSQAIKTAEYMLLKSKMTEHQEKESKSLPIDPPVDPSSRKAQNRARRLAK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YEQTLALRQQGYKIKDIAHHLGIGKRTVYTYLAADTFPEYKVIS HHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA