Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340301
Identifier: 158340301
GI number: 158340301
Start: 168075
End: 168251
Strand: Reverse
Name: 158340301
Synonym: AM1_C0222
Alternate gene names: NA
Gene position: 168251-168075 (Counterclockwise)
Preceding gene: 158340303
Following gene: 158340300
Centisome position: 61.6
GC content: 45.76
Gene sequence:
>177_bases ATGTCCGCTCATAGCGACTGTGAAACCGGTGAGCGGTCTGATGACAGACTGGACAACAAGCCAAAACTTGAGTTGAAGAA ATGTGGAATGTTATCTGAAGGTTTATGGAGTCAAGATCCCAACTATCCAAATGGAGGGTGTCTTGGCATGGGAGGAATTG TTGGAGGAGTTCCATAA
Upstream 100 bases:
>100_bases TCAGTAAAGATGCGACATTTGCAGGTCTCATTAAGGCAGAAAAACTTACAGACCTGAAGCAGGATAGTTAAGCAGAAATC CACACCGGGAAGGTCTCTCA
Downstream 100 bases:
>100_bases CCATACCTGGAAAGGGTTTACCCCTCTATCCTCTACCGCATAATTGGCATCACCAAAAGTGGACTAGATCCCGAGGTGAA ACTGGGTCGAATATGGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MSAHSDCETGERSDDRLDNKPKLELKKCGMLSEGLWSQDPNYPNGGCLGMGGIVGGVP
Sequences:
>Translated_58_residues MSAHSDCETGERSDDRLDNKPKLELKKCGMLSEGLWSQDPNYPNGGCLGMGGIVGGVP >Mature_57_residues SAHSDCETGERSDDRLDNKPKLELKKCGMLSEGLWSQDPNYPNGGCLGMGGIVGGVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6152; Mature: 6021
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHSDCETGERSDDRLDNKPKLELKKCGMLSEGLWSQDPNYPNGGCLGMGGIVGGVP CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure SAHSDCETGERSDDRLDNKPKLELKKCGMLSEGLWSQDPNYPNGGCLGMGGIVGGVP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA